| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3137 |
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| Symbol | |
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| ID | 3836583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3617225 |
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| End bp | 3619792 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637827252 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_428219 |
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| Protein GI | 83594467 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.045119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCAGG TCCCCCCGCC CCCTCCGACA GGCTTTGCCG ACCACGCCTC CGCCGCCGAG
GACCGCGAGG CGGGCGACGG GCCCGCGCCG TCGATCGCCG AGGGGCTTTC GGCGGCGCTG
TTCCAATCCG TGGTCGAAGC CCTGCCGGTG GGCACGGCGC TGCTGCGCGA CGGCGTCATC
GTCCATGCCA ACGCCACCCT GGCCGGCCAG ATCGGCGAGA CGATCGACAC CCTGATCGGC
AGCCCGCTGA CCAGCTATCT GACCCCGGCC GACGCCCTGG CGGTACAGAA GGTCGTTGAG
GGGGCCATCG CCCTGCACGG CGGGGTACCG GTGCGCCGGA TCGCCCATAT CCGCCATATA
TCGGGAAGCG AGCGGGTTTA CAGCTTGCGC TTTTCCCCCC TTGATAACGG CCCCCATCCG
TTGTTGGTCG TTATCACCCG CGATATGACC GCCCAGGTCG CCGCCGAGAA CGCCCTGCGC
GCCGCCGAAG GCAAATACCG GGCGATTTTC GAAAACGCCG TCGAGGGCAT CTATCAATCC
ACCCCCGACG GCACCTATCT CGATGTCAAT CCGGCCCTGG CGCGGATCTA TGGCTATGCC
TCGCCGGCCG AGTTGATCGC CCATTTCACC GATATCGCCA GCCAGCTTTA TGTCGACGGG
ACCAAGCGCG GCGAGTTCCA GCGGCTGATG CGCGAGACCG GCGAGGTTCG CGATTTCACC
GCCGAGGTCT GGCGCTGCGA CGGCCATACC ATCTGGATCA CCGAAAACGC CCGCTGTGTG
CGTGGCCCCG ACAACGAGGT TCTCTACTAC GAGGGCACGG TCGAAGACAT CACCGCCCAG
CGCCAGTCGC AAGAAACCAT GCGGCTGCTC GGCAAGGTGT TCACCTCGAT CGCCGAGGGC
ATCGTGCTGC TGGAACGCGA TCTCACCGTG CGCACCGTCA ACCCGGCTTT CGAAGCGATG
ACCGGCCTTT TGCGCCAGGA CATGGAAGGC CGCCCCGCCC GCCTGTTCGC CTCGGGGCTG
CACGAGAACG ACTTCCTGGC CACCGTCGCC GCCGAGGTCG ACCGCGCCGG GCTGTGGCGC
GGGGAAATCT GGGGAGAGCG CCGCGAGGGG CCGCCCTATA GCGGCGAGAT GACGGTGACC
GCCGTGCGCA CCCGCGCCGG CGAGACCACC CATTACGTCG CCGCGATCAC CGATATCACC
AAGCGCAAGC GCGATGAGGA GCACATCCGC TTCCAGGCCA ATTTCGACAT GCTGACCCAT
CTGCCCAACC GCCATCTGAT CATGGACCGG CTGGAGCAGG CGATGCATCA GGCCCAGCGG
ACCGGCCGCC AAGTCTGCGT GATGTTCCTC GATCTCGACC GCTTCAAGCA GATCAATGAT
TCCTATGGCC ATTCGGCCGG CGACGAGGTG TTGAAGCTGA CGGCCAGGCG CCTGCGCAAT
TGCGTCCGCA TCTCCGATTC GGTCGGCAGG CTGGGCGGCG ATGAATTCAT CGTCATCTTG
TCCAATGTCG AAGACCAACA CGCTGGGGCC TATATCGCCG AAAAGATCCT CTATTCGCTG
TCGGAGCCCT TTCCCATCGG CGGCACCGAG GTTTTCTGCA TTCCCTCGGT CGGCATCACC
TATTTCCCCG ACCACGGCGA AACCGCGCCC GATCTGCTGC GCAACGCCGA TGTGGCGATG
TACCACGCCA AGCAGGGCGG CGAGCGGCGC TATGCCATCT TCACCCCCGA TATGGCCCGG
CGCTCGCTGG CCCTGCTGAC CATGGAAAGC GACCTGCGCC ATGCCCTGGC GCGCGACGAA
TTCGAACTGC ACTTCCAGCC CAAGGTCCGC GCCGACCTGA CGCTGATCGG CGCCGAGGCG
CTCATCCGCT GGCGCCACCC GGAAAAGGGC CTGATCAATC CCGGGGATTT CATTCCCTTG
GCCGAGGAAT CCGGGCTGAT CCTGCCCATC GGCCGCTGGA CCCTGCGCGA AGCCTGCGAC
CGGGTGATGA GCTGGCGGGC CGAGGGACTG ACCATCCCCA GCGTTTCGGT CAATGTCAGC
CCCCGCCAAT TCCAGGATCA GACCCTGGTG GAAACCGTGC GCCAGATCCT GGTGGAAACC
GGTCTCGAAC CCGAAGCCCT TGATCTGGAA ATCACCGAAA CGGTGATGAC GGGCGATGTG
GAACATGCGG TGGGCACCCT GCGCGCCCTC AAGGATCTGG GGGTGACCCT GTCGATCGAT
GATTTTGGCA CCGGTTACTC GTCGCTGAAT TACCTCAAGA CCTTTCCCAT CGACACCCTC
AAGATCGACC AGACCTTCGT GCGCGACGTG CTCCATAGCG GCAAGGACGC CGCCATCGTC
TCGACCATCA TCGCCCTGGC GCGCAATCTC GGCTTCAGCG TCGTCGCCGA AGGGGTGGAG
GAGATCGAGC AGGCCGAATT CCTCGGCTCG CGCGATTGCC AGAATTTCCA GGGGTTCTTG
TACTCGCGCC CCCTTCCCCC GGCGGAATTC ACCACGTTCC TGCGCACCGC CAAACTCGAG
ACGGCGACGC CCCCGGACCT GGTTCCCAGT ATCGCGCCCG GGCCGTAA
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| Protein sequence | MVQVPPPPPT GFADHASAAE DREAGDGPAP SIAEGLSAAL FQSVVEALPV GTALLRDGVI
VHANATLAGQ IGETIDTLIG SPLTSYLTPA DALAVQKVVE GAIALHGGVP VRRIAHIRHI
SGSERVYSLR FSPLDNGPHP LLVVITRDMT AQVAAENALR AAEGKYRAIF ENAVEGIYQS
TPDGTYLDVN PALARIYGYA SPAELIAHFT DIASQLYVDG TKRGEFQRLM RETGEVRDFT
AEVWRCDGHT IWITENARCV RGPDNEVLYY EGTVEDITAQ RQSQETMRLL GKVFTSIAEG
IVLLERDLTV RTVNPAFEAM TGLLRQDMEG RPARLFASGL HENDFLATVA AEVDRAGLWR
GEIWGERREG PPYSGEMTVT AVRTRAGETT HYVAAITDIT KRKRDEEHIR FQANFDMLTH
LPNRHLIMDR LEQAMHQAQR TGRQVCVMFL DLDRFKQIND SYGHSAGDEV LKLTARRLRN
CVRISDSVGR LGGDEFIVIL SNVEDQHAGA YIAEKILYSL SEPFPIGGTE VFCIPSVGIT
YFPDHGETAP DLLRNADVAM YHAKQGGERR YAIFTPDMAR RSLALLTMES DLRHALARDE
FELHFQPKVR ADLTLIGAEA LIRWRHPEKG LINPGDFIPL AEESGLILPI GRWTLREACD
RVMSWRAEGL TIPSVSVNVS PRQFQDQTLV ETVRQILVET GLEPEALDLE ITETVMTGDV
EHAVGTLRAL KDLGVTLSID DFGTGYSSLN YLKTFPIDTL KIDQTFVRDV LHSGKDAAIV
STIIALARNL GFSVVAEGVE EIEQAEFLGS RDCQNFQGFL YSRPLPPAEF TTFLRTAKLE
TATPPDLVPS IAPGP
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