| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3135 |
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| Symbol | |
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| ID | 3836581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3614947 |
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| End bp | 3616161 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637827250 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_428217 |
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| Protein GI | 83594465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0167539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCT CCCCGCCCCC CGGCTTCGGC GTGAGCGGAA GCGACTTGAC AATCGGCGGC
CAAAGGGTGT CGCACCTGGC GCGGATCGCC GGGGGCACGC CGTTTTACGC CTATGACCGG
GGCGCGGTGA GCGCGCGCAT CGCCGCCCTG CGCGCGGCGC TGCCGGCCGG GATGGCGATC
CGCTATTCCC TCAAGGCCAA TCCGATGGCG GCCCTGCTCG CCCATATGGC GCCGCTAGTC
GATGGCTTCG ATGCCGCCTC GGCCGGCGAA CTGCGCGCCG GTTTGGCCGT GGGCATGGCC
CCGGCGGCGC TGTCGATCGC CGGCCCGGGA AAAAGCCCGG CCGATATTCT TAGCGCCGTG
GCGGCGGGGG CGCTGGTGGT CGTGGAAAGC CTGGCCGAGG TCGGACGGGT CGCCCAGGCC
GGAAACGCCA GCGGCCTGCG CCCGCGCGTC CTGGTCCGCG TCAACCCCGA GGCCGAGATC
CAGGGCGCGG GCTTGCGCAT GGGTGGCGGC GCCCGTCCCT TTGGCATCGA CGCCGATCAG
GTGCCCGGGG TGCTGGCCGC CATCGCCGCC CATGATCTCG ACTATCAGGG CCTGCATTGT
TTCTGGGGCT CGCAGGCGCT GGACGCCGAA CGCATCGCCC GCGCCTTCGC CGTGGTCGGC
CAGACCCTGC TCGACCTCGC CGGCCCGCGG CCGCCACGCC AGATCGTCAT CGGCGGCGGC
TTTGGCATCC CTTACACGCC GACCAGCGCG CCGCTTGATC TGGCGCGCGC CGGGGCCGCC
GTCGCCGAGA CCGCCGGCCT GCTTGGCGAC CACCTGCCGG GGGTGAGCCT GGGCCTCGAG
TTGGGCCGGT TCCTGGTCGG CGAGGCCGGC GTATATGTTT GCGCCATCCG TGAAAGCAAG
CGCTCGCGCG GGAACCTGTT TTTGGTGACC GATGGCGGGC TGCACCACAA TCAGGCGGCC
ACCGGTAATT TCGGTCAGGT GGTGCGACGG CCCTATCCCC TGGTCATCGC CACCAGGATG
GGCGAGCCCG TAAGCGAGCG GGCGACGATC ACCGGCTGCC TGTGCACCCC GCTCGATGTC
TTCGCCGAGG CTTTGGCGAT CCCGGCGGCG GCCGAGGGCG ATCTGGTGGC GATCTTCCAA
TCTGGCGCCT ATGGGGCCAG CGCTAGCCCG AGCGCCTTTC TCGGGCATCC CCCGGCGGTT
GAACTGCTGG TGTAA
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| Protein sequence | MTASPPPGFG VSGSDLTIGG QRVSHLARIA GGTPFYAYDR GAVSARIAAL RAALPAGMAI
RYSLKANPMA ALLAHMAPLV DGFDAASAGE LRAGLAVGMA PAALSIAGPG KSPADILSAV
AAGALVVVES LAEVGRVAQA GNASGLRPRV LVRVNPEAEI QGAGLRMGGG ARPFGIDADQ
VPGVLAAIAA HDLDYQGLHC FWGSQALDAE RIARAFAVVG QTLLDLAGPR PPRQIVIGGG
FGIPYTPTSA PLDLARAGAA VAETAGLLGD HLPGVSLGLE LGRFLVGEAG VYVCAIRESK
RSRGNLFLVT DGGLHHNQAA TGNFGQVVRR PYPLVIATRM GEPVSERATI TGCLCTPLDV
FAEALAIPAA AEGDLVAIFQ SGAYGASASP SAFLGHPPAV ELLV
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