| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3132 |
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| Symbol | |
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| ID | 3836578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3611580 |
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| End bp | 3613061 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637827247 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_428214 |
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| Protein GI | 83594462 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG ATCGCCTCCT CACCTGCCTC GCGGAGTGCA GTACGCGCCT TGATGGAGCG
GACACCTGGC CGGTATTGAT GAAGCAGATC CTGGCCTTGG TCGGGGAGGC GAGCGGAGCG
ACCAGGACCT GGGTTTTCCA GACGATCACG CTAACCGATC AGCATGTCAT CCAAGATCAC
CTGTTCGAAC ATATCAGCGA GGACTGCTGG CAACTTCAGC TGCGCAAGCG CTTCCGGCTT
TTCCGCACCG CCTTGTCCGC GCCCGACTAT CATGATCTGG TCCGCGACCG TCAAAGGGGC
CTGCCGTCGC TGCTGGTGAC GGCGGAGATT GCCCCGGGCT TCCTCAAGGC CTCGCTCGAA
CGCCAAAAGA CCGCCGCCAT GCTGAGCGCG CCGATCCTGG TCGAGGGCCA GTGGTGGGGA
ACCATCGGCC TGGACGATTG TCAGGGCGGG GCGGACTGGA ACGCGACCAC CATCAAATTC
CTCCAGACTA TCGCCGGCTT GATCGCCGGT TCGATCCACC GCGAGCGCCA AAGGGTGCGC
AGCCAGCAAG TCGCCGTCAT GGAGCGCACC ACCGGGGGCG GTCTTTGGGA GCTTGACGTT
CTGCGCGGCG ATGTCTGGTG TTCGGAAACG CTGTTCCATC TGCTTGGCTA TCCCCCGCCC
TGCGCCCGCC TGACCATCCG CCGCCTGCTG CGCCACATCC TGCCCGAGGA CCGGGCGCTT
GTGATGGCCT CGGCGCGCCG CTGCATGCGC GAGGGCCTGC CGGCTTTCCG TCTGGATGTC
CGCGCTTGGC GCCACGATAG AACGCTTTTG TGGTGGGAAT TGATCATCGA TGTTACCGAA
ACCCGCCCCC TCGACGGCTT TCCCTTGCGG ATGACCGGCA TCGTCCTCGA AGTCAACGAC
CGCAAGACCC AGGAACTGGA ACTGGCGCGG ACCGCGGCGA CCGATCCTCT GACCGGCTTG
GCCAACCGCC GCTCCTTCGA AGCCCTGGCG ACCCGCCTGC TGGAAAACAA ACCGGGATCG
GGCACGCTGC TTGTGATCGA TATCGACCTG TTCAAGCATA TCAACGACTG CTTCGGCCAT
GCCGCCGGCG ATGAGGTCTT GCGCCACCTC GCCATCGTCG GCCGCTCGGT GTTGCGCGAT
GGCGATCTGA TCGGTCGGCT CGGCGGCGAG GAATTCGCCG TTCTTTTGCA AATGGACGGG
CCCGAAGCCT ATGCGGTGGC CGACCGCCTG TGTCAGGCGG TGCGCGAAAT GGCGGTCACC
GCGCCGTCTT GGGAACACTC CTCGGTGGTG GTGAAGATCA CCATCAGCAT CGGCATCGCC
CACCCCTGCC CCTTCGAGGA TCCGAAGTTC GCCCTGAGCG AAGCTCTGCG GCGGGCCGAC
CGGGCGCTTT ACGGGGCCAA GAAGCGGGGA CGCAATCAGA TCTGCCACGA TACGGAAGGC
CGACAGTCCG CCATTTCCCG GGACAACCGG GCAAAAAAAT AG
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| Protein sequence | MSADRLLTCL AECSTRLDGA DTWPVLMKQI LALVGEASGA TRTWVFQTIT LTDQHVIQDH
LFEHISEDCW QLQLRKRFRL FRTALSAPDY HDLVRDRQRG LPSLLVTAEI APGFLKASLE
RQKTAAMLSA PILVEGQWWG TIGLDDCQGG ADWNATTIKF LQTIAGLIAG SIHRERQRVR
SQQVAVMERT TGGGLWELDV LRGDVWCSET LFHLLGYPPP CARLTIRRLL RHILPEDRAL
VMASARRCMR EGLPAFRLDV RAWRHDRTLL WWELIIDVTE TRPLDGFPLR MTGIVLEVND
RKTQELELAR TAATDPLTGL ANRRSFEALA TRLLENKPGS GTLLVIDIDL FKHINDCFGH
AAGDEVLRHL AIVGRSVLRD GDLIGRLGGE EFAVLLQMDG PEAYAVADRL CQAVREMAVT
APSWEHSSVV VKITISIGIA HPCPFEDPKF ALSEALRRAD RALYGAKKRG RNQICHDTEG
RQSAISRDNR AKK
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