| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3126 |
|---|
| Symbol | |
|---|
| ID | 3836572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3605249 |
|---|
| End bp | 3606325 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637827241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428208 |
|---|
| Protein GI | 83594456 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.764656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA TCAAGCTTTC GTCCTTCGCC GCCTTCAACG AGCGCTTCGG CGCCGCATTG
AACGTCGGCA CGATCGGCGG CTTTTTTCAT TCCCCCGAAT GGTTCGCCTG CCTGTTCGCC
CATGGCCTGG AACCCGCCGA CGCCGGGGCG ACCCCGGCGA TCTTCGTCCT CGATCAGGAG
GGTCCCCGGG CCGCGCTATT TTGCCTGCGC CGCCAGAACG GCATCTTGCG CAGCCTGACC
AGCTATTACA CCACCGACTA CACCGCCAGT TGCCCGGCCG GCGGCGGCGA GCGGGCGGCG
ATCATCGAAG ATCTTGGCCG TCATCTGTCC CAAAAGCTGG GGCGACGGGG CGCGCCATCG
CTGGAACTGC GCTATCTGCG GGCGGACTCG CCCGATCTGG CGGCTTTGGA GCGCGGGTTG
CGCCGACCGC CGCTGGTCCA CGGCCGCTTC GCCCAATGGC AAAACTGGTA TGCGCCGGTC
GAGGCTGGGG CCTATGGCGC TTACGCCGCC GCCCGTCCCT CGCGCCTGCG CCACACCCTG
GCCCGCAAAA AGGCGAGGCT GGAGCGCCAG GGCACGATGA CCCTGCGCCT CCACCGCACC
GCCGATGCCG GGGCTTTGGC CGCCTATGAG ACCGTCTATG GCGCAAGCTG GAAGCCGGCC
GAAGCGTCAC CGGACTTTAT ACGCGCCCTG GCCGTCACGG CGGCCAAGGC CGGGGCCCTG
CGCCTGGGGG TTCTCCACAT CGACGGCGCC CCGGCGGCGG CCCAGATCTG GCTGGTCTCG
GCCGGGCGGG CGACCATCTA CAAGCTGGCC CACCATCCGC GTTTCGATGA CCTGTCGGTC
GGCTCGCTGC TCACGCAAGC CCTGGCCGAG GAGGTGATCA ACCGCGACGG CGTGAGCGAG
ATCGACTTCG GCCTGGGCGA CGAGCCCTAT AAGCGCGACT GGATGACCGC GGAGCGCCCG
GTGGTCGGGC TGGAGATCCA GTCTCCGACC ACGGCGCGCG GCCTGATCGG CTGCGCCCGC
CTCGGCCTGG GCCGCCTGCG CCGATCCCTT CGCCCGGTCA ATACAACTCG GTCCTGA
|
|---|
| Protein sequence | MSLIKLSSFA AFNERFGAAL NVGTIGGFFH SPEWFACLFA HGLEPADAGA TPAIFVLDQE
GPRAALFCLR RQNGILRSLT SYYTTDYTAS CPAGGGERAA IIEDLGRHLS QKLGRRGAPS
LELRYLRADS PDLAALERGL RRPPLVHGRF AQWQNWYAPV EAGAYGAYAA ARPSRLRHTL
ARKKARLERQ GTMTLRLHRT ADAGALAAYE TVYGASWKPA EASPDFIRAL AVTAAKAGAL
RLGVLHIDGA PAAAQIWLVS AGRATIYKLA HHPRFDDLSV GSLLTQALAE EVINRDGVSE
IDFGLGDEPY KRDWMTAERP VVGLEIQSPT TARGLIGCAR LGLGRLRRSL RPVNTTRS
|
|---|
| |