| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3117 |
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| Symbol | |
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| ID | 3836563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3595017 |
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| End bp | 3595646 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637827232 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_428199 |
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| Protein GI | 83594447 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.222433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGCG CGTGCATTGT TCGGAGGCTT TCTCTTCTTT TCGTAGGGGT GGCGTTTCTT
GGCGGCCTTG CGGCCTGTTC GGGTTTGGAT GCGCCGCCGG CGACCGGATT CGAGACGGGA
GAGCGACCGG TCTATGTGGT CGGCCCCGGG GATTCGCTGG ATGTCTTCGT CTGGGGGCAG
CCCGATCTGT CGCGCTCCAT CGTCGTTCGC CCCGACGGCC GCCTGACCCT GCCGCTGGTC
ACCGATCTGG TCGCGGCGGG CAAAACGCCC TCTGAATTAT CGGCCGCGAT CACCGAGCAG
CTGCAGACCT ACGTGCAAAA TCCGGTGGTT TCGGTGATGG TCGTCAATTT CGCCGGCCCC
TTCGACAAAC AGGTCCGCGT CGTCGGCGAG GCCGCCACGC CCAAGGCCCT GCAATACCGC
GACCGCATGA CCACTCTGGA CGCGATGATC GAAGTCGGCG GCTTGAAGCA GTTCGCCGCC
GGAAACCGCG CCGTTCTGGT GCGCGGCCAG CCGCCCGAGG CCAAGTCCTA CCGCGTCCGT
CTGGAAGATC TGATGAACGA CGGCGACATC ACCGCCAATG TGCCGTTGAT GCCCGGTGAC
GTTCTGATCA TTCCGCAGAG CTGGTTCTAG
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| Protein sequence | MIRACIVRRL SLLFVGVAFL GGLAACSGLD APPATGFETG ERPVYVVGPG DSLDVFVWGQ
PDLSRSIVVR PDGRLTLPLV TDLVAAGKTP SELSAAITEQ LQTYVQNPVV SVMVVNFAGP
FDKQVRVVGE AATPKALQYR DRMTTLDAMI EVGGLKQFAA GNRAVLVRGQ PPEAKSYRVR
LEDLMNDGDI TANVPLMPGD VLIIPQSWF
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