Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3079 |
Symbol | |
ID | 3836525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3544824 |
End bp | 3545696 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637827194 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_428161 |
Protein GI | 83594409 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.765658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAAA AGATTGGCGT GATCGGCGCT GGCCAGATGG GCAATGGTAT CGCCCATATC TGCGCTTTGT CGGGTTATCA GGTCCAGATG ATGGACGTGA ACGAGGCCGC GCTCGAACGT GGCATGGGGT CGCTGCGCAG GAATCTCGAA CGCCAGCAGG CCAAGGGCAA GATCTCGCAG GAAGATCTTG AAAGCACCCT GGCGCGGATC ACCCCGACCT CGACCATGAA GAGCTTCGAC GACTGCGATC TGGTGATCGA GGCGGCGACC GAGGACGAAG GCGTCAAGCG CAAGATCCTG GCCGAGTTGT GCCCGGTGCT CAAGCCGTCG TGCATCGTCG CCTCGAACAC CTCGTCGATC TCGATCACCC GTCTCGGCGC CTCGACCGAC CGCCCCGAGA AGTTCATGGG CATGCATTTC ATGAACCCGG TGCCGGTGAT GAAGCTGGTC GAATTGATCC GCGGCATCGC CACCGGCGAG GAAACCTTTT CTCTGATCCG CCAGTTGGTT CTGAAGATGG GCAAGATCCC GGTTTCGGCC GAGGATTTCC CCGCCTTCAT CGTCAACCGC ATCCTGCTGC CGATGATCAA CGAGGCCGTC TATACCCTGT ATGAGGGCGT GGGATCGGTC GATGCCATCG ATACGGCGAT GCGCCTGGGC GCCAACCATC CGATGGGCCC GCTGGAGCTG GCCGATTTCA TCGGTCTGGA TGTCTGTCTG GCGGTGATGC ACGTTCTTCA CGAGGGTTTG GCCGATACCA AATACCGGCC CTGCCCGCTG CTGGTGAAAT ACGTCGAAGC CGGCTGGCTG GGTCGCAAGA CCGGCAAGGG CTTCTATGAC TATTCGGGCG AGACCCCCGT TCCCACCCGT TAA
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Protein sequence | MVEKIGVIGA GQMGNGIAHI CALSGYQVQM MDVNEAALER GMGSLRRNLE RQQAKGKISQ EDLESTLARI TPTSTMKSFD DCDLVIEAAT EDEGVKRKIL AELCPVLKPS CIVASNTSSI SITRLGASTD RPEKFMGMHF MNPVPVMKLV ELIRGIATGE ETFSLIRQLV LKMGKIPVSA EDFPAFIVNR ILLPMINEAV YTLYEGVGSV DAIDTAMRLG ANHPMGPLEL ADFIGLDVCL AVMHVLHEGL ADTKYRPCPL LVKYVEAGWL GRKTGKGFYD YSGETPVPTR
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