Gene Rru_A3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3054 
Symbol 
ID3836500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp3517282 
End bp3517782 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID637827169 
Productribonuclease H 
Protein accessionYP_428136 
Protein GI83594384 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0453376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG CGGCCGGCGA CGAGATCAAG CGCGTGCGCG TCGATATGTT CACCGATGGC 
GCCTGTTCGG GCAATCCGGG CCCGGGCGGC TGGGGCACCA TCTTGCGCTG GGGCGACACC 
GAAAAGGAGT TGTGGGGCGG CGAAACGCCG ACCACCAACA ACCGCATGGA ATTGATGGCG 
GTGATTCGCG GCCTGGAGGC CCTGCGCCGG CCGGTCACGG TGACCATCCA CACCGACAGC 
CGCTATGTCC ACGACGGTAT CACCGGCTGG ATCCACGGCT GGAAGCGCAA CGGCTGGAAG 
ACGGCGGCCA AGAAGCCGGT GAAGAACGAA GACCTGTGGC GCCGCCTGGA CGCGGCTTTG 
GGCACCCATG ACATCAGTTG GCAATGGGTG CGCGGCCATT CGGGACATGT GGAAAACGAA 
CGCGCCGACG AATTGGCCCG TCGCGGCACC AGCGAAGCCC GCCAGGGCAA GGTCGACGGC 
CAGTCTTCGA CCATCCTTTA G
 
Protein sequence
MSAAAGDEIK RVRVDMFTDG ACSGNPGPGG WGTILRWGDT EKELWGGETP TTNNRMELMA 
VIRGLEALRR PVTVTIHTDS RYVHDGITGW IHGWKRNGWK TAAKKPVKNE DLWRRLDAAL 
GTHDISWQWV RGHSGHVENE RADELARRGT SEARQGKVDG QSSTIL