| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3039 |
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| Symbol | |
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| ID | 3836485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3499877 |
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| End bp | 3503080 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827154 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_428121 |
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| Protein GI | 83594369 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.635771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGCAGA AGGAGGCAGA CATCGCGACC GCGCCGACAT CCGAAACGCC CTGGGGGGAC
CTGTTTTCGC AAGGCGGAGA CATGGGCCGA TTGATGGCGG CCTTTCCTTG GGACTCCTCG
CCGCTGGGGC CGGTCAGTGG CTGGCCAAGC CCCCTGCGCA CCGTCGTCGG CATGCTGTTG
CGCTCCAAAG CCCAAATCGT GCTGTTCTGG GGTCCGCACC TGGTGGCGCT TTACAACGAC
GCCTATGCCC CGACCATCGG CGGCAAGCAT CCCCGGGCCC TGGGCCGTCC GGCCCGGGAA
AACTGGGGAG AGCTTTGGGA TACCCTGGGT CCGATGCTCG GCCAAGTGCG GCTTACGGCC
CGGGCTTTTG GCGCGGACAA CTACCCCTTC CAGATAAACC GCCACGGCTT TCTCGAGCAG
GTTTATTTCG ACATTTCCTA TGATCCGGTT CCGGGCGCGG ACGGCGAGGT CGCCGGGGTG
TTCTGCACGG TCACCGAAAC GACCGCCCGT GTCTTCGCCG AGCGCCGACT GGCCGCCTTG
CGCGAATTAT CCATCGCCCT GTCGACCACC CTGGCGCGCA GCGATGGCCC CCTGTCGCTT
GGCGAGGCGC TGCCCAAGGC CGCCTTGGCG GCCATCGCCG GCCATTTGGC CCAAGACGTT
TCCCGCGCCG CCATCTACCG CCATGGCAGC CACGGCAAGC CTGTTCTGGT GGCGACCACC
GACCCCGCCC CCCGGACAAG ACCCCAGGCG ACGGGGACGA CCGAGGGATC GCCTTTTGCC
GAGATCCTGG AACGGGTTCG CCGCGAAGGG CGTCCCGTGC TGTGGGAAGG GGGCGGCGAT
GGCGGCCCCC AACGGCTGTT AGGCGTGCCG CTTACCGCCG AGCAGGGGCC CATGGGGGTT
CTGGTGGTGT CGGTCTGCCC GCTGGTCGCC GCCGATGCCG AATACCGCAA GGTCATCGAT
CTGGCGGCCG GGCAGATTTC CAGCGCCCTG ACCACGGCGG CCATTCTTGA ACGCGAGCGC
GAGCGCGCCG ACGATCTGAC CCGCGTCGCC GCCGATAACG CCCGGCTTTA CCGCGAGGCG
CAACGCGAGA TCGCCGACCG CCAAGCCATC GAAGCCCAAT TCCTCCATCT GACCGACACC
CTGGAAAAGA TGGTGGAGGA GCGAACCGGC GAACGCGACC GGCTGTGGCG GGTCTCGGGC
GAGTTGATGG CGGTCGGAAC CGCCGACAGC CATATCAAGG CCGTCAACCC GGCCTGGGAA
ACCCTGCTTG GCCATGACGA AAGGCTGCTG GTCGGCGCGC CGATGAGCCT GCTGGTCCAT
CCCGACGACC GCGAGCCGAG CACCGCCGCC TTGCGGGCCA TGGAACCCCA AGGCCCCCCC
TTGCGCTTCG AAAACCGTCT GCGCGATTCG GACGGGACCT ATCATTGGAT CGCCTGGACG
ATCGTTGCCC ACGGCGCCCT GTTCTATATG GTCGGCCGCG ACGTGACCGA GGAGAAACAG
GCCCGCGACG CATTGGCCGA GGCCCATCGC CAGTTGATCG CCCAGACCGC CGAGCGCGAA
AGGGCCGAGG AGGCCCTGCG CCAAGCCCAG AAGATGGAGG TCATCGGTCA GCTCACCGGC
GGCGTCGCCC ATGACTTCAA TAACCTGCTG ACCATCATCC TGGGCAATCT GGAAACCCTG
ATCCGCCACA TCGACGGAGC GTCGCCCCCC GACCCGGCGC GGGTAAGAAC CCTGGTCGAG
CGGGCGACCC TGGGCGCCGA GCGGGCCGCC GCCCTCACCC AGCGCCTTCT CGCCTTTTCC
CGACGCCAGC CCCTTGATCC GCGCCCCCTT GATCTCAACC GGCTGACCTT GGGGCTGATC
GACCTTTTGC ACCGGACGAT CGGCGAAAAA ATCGCCCTCG ACACCCGGCT GTCGATGGTG
CCGGTCGGCG TGCTCGCCGA TGCCAACCAG CTTGAAAGCG TCGTGCTCAA TCTGGCGCTC
AACGCCCGCG ACGCCATGCC CACGGGCGGA CGGTTGATCC TTGAAACCAC CGCCGATCTG
GTGATCGAGG CTCCGACCGC CGAAAAACGC CCGGCAAAGG GCAATCCCGC CGGCGCTCCG
CCGGGAACCT ATGCGGCCCT GCGCGTCACC GATACGGGAA AGGGCATGGA GGCCGGGGTT
CTGGCCCGGG TTTTCGATCC CTTTTTCACC ACCAAGGATG TCGGCCAGGG CACCGGCCTC
GGCCTGTCGC AGGCCTATGG CTTCATCAAG CAATCCGGCG GCCATATCGG CATAGAAAGC
GAACCGGGCC AGGGGACCAC CGTGACCATC TTGCTGCCCC GTCTTGAGGG GGCCCTGCCG
CTTCCCGAGG AGAGTGACCG CGACGAGACG CCCGCCGCCC TGGGCGGACT TGAGATCACG
CCCCCGCCGG GCGATCCGTC GATCCTGCTG CTGGTGGTCG AGGATGACCC GTCGGTGCGG
GCCCATTCCA CCGCGTCCTT GCGCGAACTG GGCTATCAGG TGATCGAAGC CGGGAATGGC
GCCGAGGCGC TTGGGCACTT GGCCGCCCAT CCCGATGTTG CCTTGATGTT CACCGATATC
GGTCTGCCCG GAGGAATGGA CGGTCGCCAA TTGGCCGAGC TGGCGCGGCG GAACCGCCCC
GATCTCGCCG TGGTGCTGAC CACCGGCTAC GCCCGCGACG CCCTGAACGG CAATGTTCCC
CTCGCCCCCC GGATGGCGCT GCTGACCAAG CCGTTTTCCT TCACCGCCCT GGCGCTCAAG
GTTCACGAGG TGCTTCCGCC CCGCCCCGCC CCCCAATCGT CCGCCCCGCA AGGCCCCGTA
ACCGTGTTGT TGGTCGAAGA CGATCCCTTG GTCAGCCTCG CCGCCGCCGA TCTGCTGCTG
TCGCTGGGCT GCGCGGTCGA TCAAGCTTAC AGCGTGGCCG ACGCCCTGGC CCAGGCCAGC
GCCGCCACCC CCGATGTCGC GGTGATCGAT ATCGGCTTGC CCGATGGACG CGGCGACGAT
CTGGCCCAAA CCCTGCGCCA GCGCCTTCCC GGTCTGCCGA TCGTCATCGC CTCGGGCTAT
GACCGTTCGG AAATCGACGC CCGCTTCGGC GACGATCCAC GCCTGCGGTT TCTGGGAAAA
CCCTATCTCG ACAGCCAGCT TGAAGCGGCG CTGACCGGCG CCCTTGGCCA CCCCCTGGAG
CGATCGACCG CCCCCCGGGC TTGA
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| Protein sequence | MGQKEADIAT APTSETPWGD LFSQGGDMGR LMAAFPWDSS PLGPVSGWPS PLRTVVGMLL
RSKAQIVLFW GPHLVALYND AYAPTIGGKH PRALGRPARE NWGELWDTLG PMLGQVRLTA
RAFGADNYPF QINRHGFLEQ VYFDISYDPV PGADGEVAGV FCTVTETTAR VFAERRLAAL
RELSIALSTT LARSDGPLSL GEALPKAALA AIAGHLAQDV SRAAIYRHGS HGKPVLVATT
DPAPRTRPQA TGTTEGSPFA EILERVRREG RPVLWEGGGD GGPQRLLGVP LTAEQGPMGV
LVVSVCPLVA ADAEYRKVID LAAGQISSAL TTAAILERER ERADDLTRVA ADNARLYREA
QREIADRQAI EAQFLHLTDT LEKMVEERTG ERDRLWRVSG ELMAVGTADS HIKAVNPAWE
TLLGHDERLL VGAPMSLLVH PDDREPSTAA LRAMEPQGPP LRFENRLRDS DGTYHWIAWT
IVAHGALFYM VGRDVTEEKQ ARDALAEAHR QLIAQTAERE RAEEALRQAQ KMEVIGQLTG
GVAHDFNNLL TIILGNLETL IRHIDGASPP DPARVRTLVE RATLGAERAA ALTQRLLAFS
RRQPLDPRPL DLNRLTLGLI DLLHRTIGEK IALDTRLSMV PVGVLADANQ LESVVLNLAL
NARDAMPTGG RLILETTADL VIEAPTAEKR PAKGNPAGAP PGTYAALRVT DTGKGMEAGV
LARVFDPFFT TKDVGQGTGL GLSQAYGFIK QSGGHIGIES EPGQGTTVTI LLPRLEGALP
LPEESDRDET PAALGGLEIT PPPGDPSILL LVVEDDPSVR AHSTASLREL GYQVIEAGNG
AEALGHLAAH PDVALMFTDI GLPGGMDGRQ LAELARRNRP DLAVVLTTGY ARDALNGNVP
LAPRMALLTK PFSFTALALK VHEVLPPRPA PQSSAPQGPV TVLLVEDDPL VSLAAADLLL
SLGCAVDQAY SVADALAQAS AATPDVAVID IGLPDGRGDD LAQTLRQRLP GLPIVIASGY
DRSEIDARFG DDPRLRFLGK PYLDSQLEAA LTGALGHPLE RSTAPRA
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