Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3011 |
Symbol | |
ID | 3836456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3468426 |
End bp | 3469133 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637827125 |
Product | isochorismatase hydrolase |
Protein accession | YP_428093 |
Protein GI | 83594341 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.679092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACG CCCCGCAGCC CGCGTGGAAG ACCGCCTTTT GCTCGTTCTA TTACCAGGAT GCGCCCCCGC CTGACGATCC GCTTCTCGAA GCCGGCAAGC TCGCCCTGCT GGTCATCGAT ATGCAAAACG TCTATGTCAG CCGCCCCGAT CGGGCCAGCC TCGATGACGC CGGAAAGCGC GCTTACGACG CCTGGACGCC CTTTCACCAG CGCATGGGGG AGACGGTCAT TCCGACCATC GCCCGCCTGC AGGCGGCCTT TCGCGCTGGC GGCCATCCGG TGCTCTTCGC CCGCATCGCC TGCCAGACCA CCGATGGCCG CGACCGGTCG CTCAGCCAGA AACTGCCCGG CTGGAACAAT CTGCTGCTAC CCAAGGACGC CCCGGCCTCG CAGATCCTGG CCGAGCTCAG CCCGCTGGGC GACGAGATCG TCGTGACCAA AACCACCGAC AGCGCCCTGA CGGGCACCAA TCTGCGGCTG ATCCTGACCA ACCTCGGGGT GACCCAGGTG GTCTGCTGCG GCATCTTCAC CGATCAATGC GTGTCGTCGA CCGTGCGCAG CTTGGCCGAT GAAAGCGTTT CGGTGATCGT TGTCGAAGAT GGCTGCGCCG CCGCCACCGA CGCCCTGCAC CGCCAGGAAC TGGCGATCAT CAACCGCATC TATTGCGCGG TGATGACCGC CGACGATGTC CTGGGCTATC TGCCGTAA
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Protein sequence | MSDAPQPAWK TAFCSFYYQD APPPDDPLLE AGKLALLVID MQNVYVSRPD RASLDDAGKR AYDAWTPFHQ RMGETVIPTI ARLQAAFRAG GHPVLFARIA CQTTDGRDRS LSQKLPGWNN LLLPKDAPAS QILAELSPLG DEIVVTKTTD SALTGTNLRL ILTNLGVTQV VCCGIFTDQC VSSTVRSLAD ESVSVIVVED GCAAATDALH RQELAIINRI YCAVMTADDV LGYLP
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