Gene Rru_A3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3011 
Symbol 
ID3836456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3468426 
End bp3469133 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID637827125 
Productisochorismatase hydrolase 
Protein accessionYP_428093 
Protein GI83594341 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.679092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACG CCCCGCAGCC CGCGTGGAAG ACCGCCTTTT GCTCGTTCTA TTACCAGGAT 
GCGCCCCCGC CTGACGATCC GCTTCTCGAA GCCGGCAAGC TCGCCCTGCT GGTCATCGAT
ATGCAAAACG TCTATGTCAG CCGCCCCGAT CGGGCCAGCC TCGATGACGC CGGAAAGCGC
GCTTACGACG CCTGGACGCC CTTTCACCAG CGCATGGGGG AGACGGTCAT TCCGACCATC
GCCCGCCTGC AGGCGGCCTT TCGCGCTGGC GGCCATCCGG TGCTCTTCGC CCGCATCGCC
TGCCAGACCA CCGATGGCCG CGACCGGTCG CTCAGCCAGA AACTGCCCGG CTGGAACAAT
CTGCTGCTAC CCAAGGACGC CCCGGCCTCG CAGATCCTGG CCGAGCTCAG CCCGCTGGGC
GACGAGATCG TCGTGACCAA AACCACCGAC AGCGCCCTGA CGGGCACCAA TCTGCGGCTG
ATCCTGACCA ACCTCGGGGT GACCCAGGTG GTCTGCTGCG GCATCTTCAC CGATCAATGC
GTGTCGTCGA CCGTGCGCAG CTTGGCCGAT GAAAGCGTTT CGGTGATCGT TGTCGAAGAT
GGCTGCGCCG CCGCCACCGA CGCCCTGCAC CGCCAGGAAC TGGCGATCAT CAACCGCATC
TATTGCGCGG TGATGACCGC CGACGATGTC CTGGGCTATC TGCCGTAA
 
Protein sequence
MSDAPQPAWK TAFCSFYYQD APPPDDPLLE AGKLALLVID MQNVYVSRPD RASLDDAGKR 
AYDAWTPFHQ RMGETVIPTI ARLQAAFRAG GHPVLFARIA CQTTDGRDRS LSQKLPGWNN
LLLPKDAPAS QILAELSPLG DEIVVTKTTD SALTGTNLRL ILTNLGVTQV VCCGIFTDQC
VSSTVRSLAD ESVSVIVVED GCAAATDALH RQELAIINRI YCAVMTADDV LGYLP