| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3010 |
|---|
| Symbol | |
|---|
| ID | 3836455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3467521 |
|---|
| End bp | 3468315 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637827124 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_428092 |
|---|
| Protein GI | 83594340 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA ACGGCGCCTC CCCGGCGGGG TCGGGCAAGC TGTCGAAGGC CGGGCGCCAG
GAGCGGATCG TGGCCGAGCT GCGGGCGGGA CCGACCCTGC GGGTATCGGA GCTGGCGACC
ACCCTGGGCG TGTCGACCGA GACCATCCGC CGCGATCTCG ACGAGTTGGA GGCGCGCGGC
CTGATCAACC GCACCTATGG CGGGGCGGTC CGCCCCTTTG GCCCCGAGCC GACCATCCGC
GAGCGCCATC AGATGCTGGT CAGCGAACGC GAGATCATCG CCGCCGCCGC CGCCCGCACC
ATCAGCCATG GCGATGTGCT GATCATCGGC GGCGGCGCCA CCACCACCCA TGTCGCCCGC
CGGCTGGCCG CCGAGAAGCG CGATCTGAAG GTGTTCACCG ATTCCTTCGC CGTCGCCACC
GTGCTCGCCC CCAATCCCAC CGTCGAGGTG TTCTTGTGTC CCGGCCGCTA CAACGGCCAG
GAGGGCTGCG TCTCGGGGGC CGAGACCATC GATTACATCG GCAAGATCTA TGCCAATCAC
GCCATTTTGG GGGCCACCGG TCTGACCGAG GACGGCCCCA ATGACGCCGA TATCGACGCC
GCCGCCACCT ATCGCGCCAT GGCCTTGCGG GCGACCGATG TCACCGTCGT CGCCGATCAC
ACCAAATTCG ATCGGGCGGC GATTTCGGTC TATTGCCGCT GGCCGGTGAT CAGCCGCTTG
GTCACCGATC AGCGGCCCGA AGGCGCTCTG CGGTTGATCC TCGAGCGCGC CGGGGTCGAG
GTCATCGTTC CCTGA
|
|---|
| Protein sequence | MSDNGASPAG SGKLSKAGRQ ERIVAELRAG PTLRVSELAT TLGVSTETIR RDLDELEARG
LINRTYGGAV RPFGPEPTIR ERHQMLVSER EIIAAAAART ISHGDVLIIG GGATTTHVAR
RLAAEKRDLK VFTDSFAVAT VLAPNPTVEV FLCPGRYNGQ EGCVSGAETI DYIGKIYANH
AILGATGLTE DGPNDADIDA AATYRAMALR ATDVTVVADH TKFDRAAISV YCRWPVISRL
VTDQRPEGAL RLILERAGVE VIVP
|
|---|
| |