Gene Rru_A2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2936 
Symbol 
ID3836380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3383106 
End bp3384467 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content67% 
IMG OID637827051 
Productdihydroorotase 
Protein accessionYP_428020 
Protein GI83594268 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCAGT CCTATGATCT GATCCTCAAG GGCGGCACCG CCGTTCTGCC CGGCCGTACC 
ATGCGCGCCG ATATCGCCGT GTGTGGCGGC AAGGTGGTGC GCGTCGGTTT CCTCGATGCC
GGATCGGCGC GCCAGACCAT CGATTGCGCC GGCTTGCACG TGCTTCCCGG GGTCATCGAT
ACCCAGGTGC ATTTCCGCGA GCCCGGTCTA GAGCACAAGG AGGATCTGGA AAGCGGCACG
CGGGCCGCCG TTCTGGGCGG GGTGACCGGC GTCTTCGAGA TGCCCAACAC CGCACCGGCC
ACCGACAGCC CCGAGGCCCT CGAGGAAAAG CTGACCCGGG CCCAGGGCCG CACATGGTGC
GATCACGCCT TTTTCCTGGG GGCGAGCGCG GCTAACGCCG CAGCCCTTGG CGGCTGGGAA
CGCCGGGATG GTTGCGCCGG GGTCAAGATC TTCATGGGAT CGTCGACCGG CTCGCTGCTG
GTCGATCAGG ACGAGGCGAT CGCCCGGGTC CTGGCCGGCG GCTTCCGCCG GGTCGCCGTC
CATTGCGAGG ACGAGGCCCG CTTGAAGGAG CGCAAGGCCC TGGTGGCCGA TGGGGCTTCG
GTGGCGCTTC ATCCCGAATG GCGCGACGTG GAAACCGCCC TGGCGGCGAC GCGGCGCCTG
CTGGCCTTGG CCCGCCAGGC CGGACGCAAG GTGCATGTGC TGCATGTGAC CACCGCCGAA
GAAATGGCCC TGTTGCAAGA CAACCGCGAC ATCGCCAGCG TCGAGGTGAC CCCCCAGCAT
CTGACCCTTG CCGCCCCCGA TTGCTACGAG GGGCTGGGGA CCTTCGCCCA GATGAACCCG
CCGATTCGCG AGGCTCGCCA CCGCGAAGCC CTATGGCGGG CCCTGGAGCA AGGCGTCGTT
GATATCATCG GCTCCGATCA CGCGCCCCAT ACCCTGAAGG AGAAATCCCT TCCCTATCCC
AAAAGCCCCT CGGGCATGCC CGGAGTGCAG ACCCTGGTTC CGGTGATGCT TGATCATGTC
AACACCGGCA AGCTGAGCCT GGAACGCTTC GTCGATCTGA CCAGCGCCGG ACCCGCCCGG
GTTTATGACA TCGCCGGCAA GGGGCGGATC GCGGCGGGCT ATGACGCCGA TTTCACCGTG
GTCGATATGA ACGCCGAACG CACCATCACC AACGAATGGA TCGCCAGCAA ATGCGGCTGG
ACACCGTTTC ATGGGCTGAG CGTGCGCGGC TGGCCGGTGA TGACCATCAT TCGCGGGGCC
ATCGTCATGC GCGACGGCGC CCTTCAGGGG CGTCCCTTGG GGGCGCCGGT GCGTTTTCAT
CCCCTGCCGC CCCTGACGAA GGAGTCCGCC GTTCTTCGGT AA
 
Protein sequence
MAQSYDLILK GGTAVLPGRT MRADIAVCGG KVVRVGFLDA GSARQTIDCA GLHVLPGVID 
TQVHFREPGL EHKEDLESGT RAAVLGGVTG VFEMPNTAPA TDSPEALEEK LTRAQGRTWC
DHAFFLGASA ANAAALGGWE RRDGCAGVKI FMGSSTGSLL VDQDEAIARV LAGGFRRVAV
HCEDEARLKE RKALVADGAS VALHPEWRDV ETALAATRRL LALARQAGRK VHVLHVTTAE
EMALLQDNRD IASVEVTPQH LTLAAPDCYE GLGTFAQMNP PIREARHREA LWRALEQGVV
DIIGSDHAPH TLKEKSLPYP KSPSGMPGVQ TLVPVMLDHV NTGKLSLERF VDLTSAGPAR
VYDIAGKGRI AAGYDADFTV VDMNAERTIT NEWIASKCGW TPFHGLSVRG WPVMTIIRGA
IVMRDGALQG RPLGAPVRFH PLPPLTKESA VLR