Gene Rru_A2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2930 
Symbol 
ID3836371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3375287 
End bp3376345 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID637827042 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_428014 
Protein GI83594262 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00193882 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGG GGAAGAAAAC TTCGGGATTG CGCCGACAGA TTTTCCTTTC GATGACGGTC 
ATGGCCTTCA GTGTCGTCCT GCTGTCGATA TGCGGATCCT ATGTGTTCTA TGCGGTCTTC
CTGACCTATT CCCCGTCCAG CATCTCCGAT GACCTGCTGC CCGCTCCGGC GGAGGTCGCC
TGGATGACCG TCACGATGCT GGCGGCCCTG CTTCTCGCCG CCGTGATCGC CATCCGATTG
GCGCGGCGGA TCCTGACGCC GCTCAACTCC GTCGCCGACA GCCTGCATCG GATGGCGGAG
GGCGACCTTT CGGCCCGGGC GGTCGCCGAC GATCTGTCGA TGGGCGAAGC CACGCGTCTG
GTGGCCGATT TCAACAACAT GGCCGAGCGC CTGGATGGCA TGGCGCGGGA ACGCGCCTTC
TGGAACGCCG CGATCGCCCA CGAATTGCGA ACGCCCGTGA CGGTTCTTCG CGGTCGCCTT
CAAGGTTTGG CGGAGGGGGT GTTCGAACCC ACCCCCGCCA TGTTCTCGGG GCTGCTGATC
CATATGGAGG GGTTGAGCCG GCTGGTCGAG GATTTGCGCG TGCTGGGCCT GGACGAAAGC
GGGCGGCTGG AGTTGCGGCT GGAGCAATGC GACCTCGCCG CCGAAATCGC GGCGCTGATC
AACGCCTTCG AGCCCAATCT GCGCGCCGCC GGTTTCGTTC TCGCCCAGGA TCTGGACGGA
GGCGAGGTCG TCTGCGACCC GATGCGGATT CGGCAGGCGC TCTCGGCGCT GCTCGACAAC
GCCATCCATC ACGCCGAACC CGGAGCCCTT CAGGTTCGCC TCCGCCTGGA GGACGAGCGG
ATCCGCCTTC AGGTCGAAGA CAAGGGGCCG GGCATCCCGA CCGACCTCAT GGAGTGCGTG
TTCGATGCGT TCCGCCGTGG CGCGAAGCCG CGCCTGGGCG GAGGTAGTGG TTTGGGATTG
GCCGTCGTAA GGGCCATCGC CCGCGCCCAT GGCGGAGAAG CCGCCTGCCG GGCCTCCGAT
AGCCAGGGAA CGATCTTCGA ACTGACGTGG CCCGCCTGA
 
Protein sequence
MASGKKTSGL RRQIFLSMTV MAFSVVLLSI CGSYVFYAVF LTYSPSSISD DLLPAPAEVA 
WMTVTMLAAL LLAAVIAIRL ARRILTPLNS VADSLHRMAE GDLSARAVAD DLSMGEATRL
VADFNNMAER LDGMARERAF WNAAIAHELR TPVTVLRGRL QGLAEGVFEP TPAMFSGLLI
HMEGLSRLVE DLRVLGLDES GRLELRLEQC DLAAEIAALI NAFEPNLRAA GFVLAQDLDG
GEVVCDPMRI RQALSALLDN AIHHAEPGAL QVRLRLEDER IRLQVEDKGP GIPTDLMECV
FDAFRRGAKP RLGGGSGLGL AVVRAIARAH GGEAACRASD SQGTIFELTW PA