Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2930 |
Symbol | |
ID | 3836371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3375287 |
End bp | 3376345 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827042 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_428014 |
Protein GI | 83594262 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00193882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGG GGAAGAAAAC TTCGGGATTG CGCCGACAGA TTTTCCTTTC GATGACGGTC ATGGCCTTCA GTGTCGTCCT GCTGTCGATA TGCGGATCCT ATGTGTTCTA TGCGGTCTTC CTGACCTATT CCCCGTCCAG CATCTCCGAT GACCTGCTGC CCGCTCCGGC GGAGGTCGCC TGGATGACCG TCACGATGCT GGCGGCCCTG CTTCTCGCCG CCGTGATCGC CATCCGATTG GCGCGGCGGA TCCTGACGCC GCTCAACTCC GTCGCCGACA GCCTGCATCG GATGGCGGAG GGCGACCTTT CGGCCCGGGC GGTCGCCGAC GATCTGTCGA TGGGCGAAGC CACGCGTCTG GTGGCCGATT TCAACAACAT GGCCGAGCGC CTGGATGGCA TGGCGCGGGA ACGCGCCTTC TGGAACGCCG CGATCGCCCA CGAATTGCGA ACGCCCGTGA CGGTTCTTCG CGGTCGCCTT CAAGGTTTGG CGGAGGGGGT GTTCGAACCC ACCCCCGCCA TGTTCTCGGG GCTGCTGATC CATATGGAGG GGTTGAGCCG GCTGGTCGAG GATTTGCGCG TGCTGGGCCT GGACGAAAGC GGGCGGCTGG AGTTGCGGCT GGAGCAATGC GACCTCGCCG CCGAAATCGC GGCGCTGATC AACGCCTTCG AGCCCAATCT GCGCGCCGCC GGTTTCGTTC TCGCCCAGGA TCTGGACGGA GGCGAGGTCG TCTGCGACCC GATGCGGATT CGGCAGGCGC TCTCGGCGCT GCTCGACAAC GCCATCCATC ACGCCGAACC CGGAGCCCTT CAGGTTCGCC TCCGCCTGGA GGACGAGCGG ATCCGCCTTC AGGTCGAAGA CAAGGGGCCG GGCATCCCGA CCGACCTCAT GGAGTGCGTG TTCGATGCGT TCCGCCGTGG CGCGAAGCCG CGCCTGGGCG GAGGTAGTGG TTTGGGATTG GCCGTCGTAA GGGCCATCGC CCGCGCCCAT GGCGGAGAAG CCGCCTGCCG GGCCTCCGAT AGCCAGGGAA CGATCTTCGA ACTGACGTGG CCCGCCTGA
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Protein sequence | MASGKKTSGL RRQIFLSMTV MAFSVVLLSI CGSYVFYAVF LTYSPSSISD DLLPAPAEVA WMTVTMLAAL LLAAVIAIRL ARRILTPLNS VADSLHRMAE GDLSARAVAD DLSMGEATRL VADFNNMAER LDGMARERAF WNAAIAHELR TPVTVLRGRL QGLAEGVFEP TPAMFSGLLI HMEGLSRLVE DLRVLGLDES GRLELRLEQC DLAAEIAALI NAFEPNLRAA GFVLAQDLDG GEVVCDPMRI RQALSALLDN AIHHAEPGAL QVRLRLEDER IRLQVEDKGP GIPTDLMECV FDAFRRGAKP RLGGGSGLGL AVVRAIARAH GGEAACRASD SQGTIFELTW PA
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