Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2913 |
Symbol | |
ID | 3836354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3356164 |
End bp | 3356847 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827025 |
Product | two component transcriptional regulator |
Protein accession | YP_427997 |
Protein GI | 83594245 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0379396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATCC TGGTGATCGA GGATGACAAG GAGGTGGCCG CCCACCTTCT CAAAGGCCTG CGCGAGGCCG GCCATGTCGC CGACAGCGTG GCCGATGGCC GCGACGGCCT GTTCCAGGCC GCCGGGGAAG CCTATGACCT GCTGATCGTC GATCGCATGC TGCCCAATGT CGACGGTCTG ACCATCGTCC GCACCCTGCG GGCTTCGGGC AAAACGGTGC CGGTGCTGAT CCTCTCGGCG CTCGGCGAGG TCGACGACCG GGTCAAGGGG CTGCGGGCGG GGGGCGATGA CTATCTGGTC AAGCCCTTCG CCTTCGCCGA GCTTCTGGCC CGCATCGACG CCCTGACCCG GCGCACGGCG GGAAGCGACG CCGAACAGAC GCGGTTGCGG GCGGGCGAGG TGGAGATGGA CCTGCTGGCC CGCCGGGTCA CCCGTGGCTC GCGCACCATC GATCTTCAGC CCCGCGAATT CCGCCTGCTT GAATACCTGA TGCGCCATGC CGATCAGGTG GTCACCCGCA CCATGCTTTT GGAAAACGTC TGGGATTATC ACTTCGACCC GCAGACCAAC GTCGTTGACG TTCATATCAG CCGCCTGCGC CGCAAGATGG ACGAGGGCTT CGCCCAGCCC TTCCTGGAAA CCGTGCGGGG GGCGGGCTAC GTCTTGCGCA CCAATGGCTC TTAA
|
Protein sequence | MRILVIEDDK EVAAHLLKGL REAGHVADSV ADGRDGLFQA AGEAYDLLIV DRMLPNVDGL TIVRTLRASG KTVPVLILSA LGEVDDRVKG LRAGGDDYLV KPFAFAELLA RIDALTRRTA GSDAEQTRLR AGEVEMDLLA RRVTRGSRTI DLQPREFRLL EYLMRHADQV VTRTMLLENV WDYHFDPQTN VVDVHISRLR RKMDEGFAQP FLETVRGAGY VLRTNGS
|
| |