| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2909 |
|---|
| Symbol | |
|---|
| ID | 3836350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3352722 |
|---|
| End bp | 3353555 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637827021 |
|---|
| Product | ABC transporter component |
|---|
| Protein accession | YP_427993 |
|---|
| Protein GI | 83594241 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.321315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGA TCCCCCCTCC CGCCCTCCCC ACCCCGGCGC CGGACCTTCC GGCGATCGAG
GTGCGCGATC TCGTCACCTA TTACGGCAAG CGCAAGATCC TTGATGGCGT GACGCTCAGC
GTGCGGACGG GCGAGGTGCT GGTGATCATG GGCGGCTCGG GATCGGGCAA AACCACCTTG
CTCAAGCATT TGCTTGGCCT GCTGCGCCCG GCGGCCGGCC AAGTCCGCAT GCTTGGCCAT
GACATCAACG CCATCTCGGC CCGCCAGCTC AACGCCCTGC GCCAGCGCAT CGGCGTCGCC
TTTCAAAGCG GGGCGTTGTT CTCGTCGCTC AGCGTCGGCG AAAACATCAT GCTGCCCCTG
CGCGAGCATA CGGATCTGGC CGAAAGCACC ATGCGCATCA TGGCGCGCAT GAAGCTCGAG
GTCGTCGATC TCGCCGGCGC CGAGGATCTG ATGCCCGCCG AGCTGTCGGG CGGCATGATC
AAGCGCGCCG CCTTCGCCCG CGCCATCGTC ATGGATCCGC GCATCCTGTT TTGCGATGAA
CCCTCCGCCG GCCTCGATCC CGTCACCTCG GCCTCCATCG ACGACTTGAT CGCCCATCTG
CGCGACGCCA CCGGCATGAC CGTGATCGTC GTCACCCATG AACTGGAAAG CGCCTTCAAG
ATCGCCGATC GCATCTGCGT GCTTGATCAC GGCAGGATCT TGGAGATCGA CACCGTCGAG
GCGATCCGCC GCAGCGCCAA TCCGCGCATT CAGGACCTGC TCGGCCGGCG CACCGAACGT
CCGGCCACGG ATCCCGATGA TTACCTGCGC CGTTTAACCG AAGGCGGCCG ATGA
|
|---|
| Protein sequence | MAQIPPPALP TPAPDLPAIE VRDLVTYYGK RKILDGVTLS VRTGEVLVIM GGSGSGKTTL
LKHLLGLLRP AAGQVRMLGH DINAISARQL NALRQRIGVA FQSGALFSSL SVGENIMLPL
REHTDLAEST MRIMARMKLE VVDLAGAEDL MPAELSGGMI KRAAFARAIV MDPRILFCDE
PSAGLDPVTS ASIDDLIAHL RDATGMTVIV VTHELESAFK IADRICVLDH GRILEIDTVE
AIRRSANPRI QDLLGRRTER PATDPDDYLR RLTEGGR
|
|---|
| |