Gene Rru_A2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2880 
Symbol 
ID3836320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3318121 
End bp3320748 
Gene Length2628 bp 
Protein Length875 aa 
Translation table11 
GC content67% 
IMG OID637826991 
Producthypothetical protein 
Protein accessionYP_427964 
Protein GI83594212 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.91223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGCG TTAATCTTCC CGCCCAGCCT GCCGAAGGCA AGGCCGAGAC CCCTCCCCAT 
TGGACATCGG GCATCGTCGC CGTTTTGGCG GCGCGGCGCC ATGCCCTGGC CTCGGCGGCC
GGCGTGGTGG TGCTGGCCGT GTTGTCCTTC GCCATCTACC ACATGGCGCG CGAGGTGGAT
TTCCAGGATG TTCTGGCCGC CCTGCGCGGC ACGCCCTGGC ATGCCGTGGG ATGGGCCGTT
CTGCTGACGG CGGTCAGTTT TTTGTCGCTA AGCGTCTATG ACGTCGAAGC CCTGGCCCAT
ATCGGCCATA AGGTGCCCTA TCCGGTGGTC GCCCTGACCT CGTTTTGTTC CTATGCGGTG
GGCAATACCG CCGGCTTTGG TCCCTTGACC GGCGGGGCCA TCCGCTTCCG CTTCTACGCG
CCGATGGGGC TGGAGCCCGA ATGCGTCGGC AAGGTGGTGG TTTTCGTCAC CGCCGCCTTC
GGTCTGGGGC TGACCGCCGT TACCGCCCTC AGCTTGCTGG TCGCCGCCGA CGACGTGGCC
GGGGTGCTGT CGCTGCCACC CCTGGCGCTG CAGGGTGGGG CCGTTCTGGC GATCGGCGGC
CTGCTGGCCC TGGTCGTCCG CGCTTCGCGC CCGGAAAGCA AGGTGGCGCT GGGCCGCGTC
GCCCTGCGCC TGCCGCGACC GCGCATCATG CTTGGCCAAT TCGCCGCCAC GGCCGTGGAT
ATCGTCGCCT GCGCCGGTAT CCTTTGGGTG TTGCTGCCCG AGATCGGCCT GGGCTTCCCC
GCCTTCGTCA CCCTTTACGC CGTGGCCATC GGCCTGGGCG TACTCAGCCA TGTTCCGGCC
GGTCTGGGGG TTTTCGAAAC CATCATGATC GCCACCCTCG GCCGCCTCGC GCCGATGGAC
CAGATCCTGG GCGCCCTGGT GCTCTACCGG GTGATCTATC ATATCTTGCC GCTGCTGCTC
GCCACCGTGC TGGTCAGCAT CGTCGAGACC CGCCGGGCGA TGGCCGGCCC CGCCGCCTCG
AAGGTGGTGC GCTCGGCCAG CCAGATGGCG CCGCCGGTGA TTTCGGCGAT GACGCTGGTT
CTGGGCGCCA TGCTGATCTT CTCGGGCGTC ACCCCGGCCC TGCCGGGCGA TCTCGATATC
CTTGACGCCT GGATCGCGCT GCCGATCGTT GAAAGCGCCC ATTTCCTGGC CAGCGTTCTT
GGGCTGGCCC TGGTGATCGT CGCCCGGGGT CTGGCCTTCC GCTTGGACGG CGCGTGGTGG
GCGGCGATCG CCGCCGCCGC CCTCGCCGTG GTGCTGTCGG TGCTCAAGGC GGTGGCCCTG
GGCGAGGCGA TCGTGCTGTC GGTTCTGGTG CTGGCCCTGC TGGCGACCCG GGCCGAATTC
TCGCGACCGG CCTCCCTGCT CCACCAAACC CTGACCCCGC CCTGGCTGGC GGCCATCGCC
ACCATCGTCA TCTCGGCCTT CGTGCTGTTG TTCCTCACCT ATCAGGGGGT GGACTACACC
GATGACCTGT GGTGGCAGTT CGAGATTTCC AACGAGGCGC CGCGTTCGTT GCGCGCCCTG
CTCGCCGTCA GCCTGGGGGC CGGATCCTTC GCCATCTGGA ACCTGCTGCG CCCGGCGCCC
GGCCGCACCC ATCTGCCCTC CCCCCAGGAG ATCGACCGCG CCCTGGCCAT CCTTGAAACC
CAGCCGATGG CGGCGGCCAA TCTGCTGCGC ATGGGCGACA AAAGCCTGAT GTTCTCCGAA
GACGGCAAGG CCTTCATCAT GTATGGCCGG CAAGGCCGCT CGTGGGTGGC GCTGTTTGAT
CCCGTGGGCG CGCGCGACTC CTGGCCCGAA CTGGTCTGGC GTTTCGTGGA GACCGCCCGC
GCCTCGGGCG GGCGGGCGGC CTTTTATCAG GTGGTCCCGG AAAATCTGGC GCTTTACGCC
GATGCCGGTC TTTCGGCCTT CAAGCTGGGC GAGGAGGCGC GCATTCCCTT GGCCGATTTC
TCGCTCAGCG GCTCCAAGCG CTATGGCCTG CGCCAGACCG TCAGCCGCTG CAGCCGCGAC
GGGCTGGTCT TTTCCCTGTT AAGCCCCGAT GAGATCGCCG CCGAGATGGA CCGCCTGGAA
GAGATCTCGG ACGCTTGGCT GGCCAGCCAT CGGGCCCGCG AGAAGCGCTT TTCGCTGGGC
GCCTTCGATC GCTCCTATGT GCAAAGCCAA ACGGTCGCCG TGCTGCGCCG GGCCGATCAG
ATCGTCGCCT TCGCCACCGT GATGACCACC GCCCTGACCG AGGAGGCCAC CATCGATCTG
ATGCGCTTTG ACGACGAGGC GCCGCGCTCG GCGATGGAAT TCCTGTTCAT CCGCCTGATG
GAGCATTTCA AGGCGGCCGG CTATGACCGC CTCCACCTGG GCATGGCGCC GCTATCGGGG
CTGTCGTCAA GCCCGGCGGC GCCCTTCTGG CACCGGGTGG GCCGGGCGGT CTTCGAGCAC
GGCGAACGCT TTTACAATTT CCAGGGATTG CGCGCCTTCA AGGCGAAATT CCAGCCCGAA
TGGCAACCGC GCTACCTGGC TGTCGCCGGC GGCCTCAACC CCGCTCTCGC CCTCGCCGAC
ATCGCCACAC TGATTGGCGG CGGCCTGAAA GGAGTGGTCG GAAAATGA
 
Protein sequence
MDGVNLPAQP AEGKAETPPH WTSGIVAVLA ARRHALASAA GVVVLAVLSF AIYHMAREVD 
FQDVLAALRG TPWHAVGWAV LLTAVSFLSL SVYDVEALAH IGHKVPYPVV ALTSFCSYAV
GNTAGFGPLT GGAIRFRFYA PMGLEPECVG KVVVFVTAAF GLGLTAVTAL SLLVAADDVA
GVLSLPPLAL QGGAVLAIGG LLALVVRASR PESKVALGRV ALRLPRPRIM LGQFAATAVD
IVACAGILWV LLPEIGLGFP AFVTLYAVAI GLGVLSHVPA GLGVFETIMI ATLGRLAPMD
QILGALVLYR VIYHILPLLL ATVLVSIVET RRAMAGPAAS KVVRSASQMA PPVISAMTLV
LGAMLIFSGV TPALPGDLDI LDAWIALPIV ESAHFLASVL GLALVIVARG LAFRLDGAWW
AAIAAAALAV VLSVLKAVAL GEAIVLSVLV LALLATRAEF SRPASLLHQT LTPPWLAAIA
TIVISAFVLL FLTYQGVDYT DDLWWQFEIS NEAPRSLRAL LAVSLGAGSF AIWNLLRPAP
GRTHLPSPQE IDRALAILET QPMAAANLLR MGDKSLMFSE DGKAFIMYGR QGRSWVALFD
PVGARDSWPE LVWRFVETAR ASGGRAAFYQ VVPENLALYA DAGLSAFKLG EEARIPLADF
SLSGSKRYGL RQTVSRCSRD GLVFSLLSPD EIAAEMDRLE EISDAWLASH RAREKRFSLG
AFDRSYVQSQ TVAVLRRADQ IVAFATVMTT ALTEEATIDL MRFDDEAPRS AMEFLFIRLM
EHFKAAGYDR LHLGMAPLSG LSSSPAAPFW HRVGRAVFEH GERFYNFQGL RAFKAKFQPE
WQPRYLAVAG GLNPALALAD IATLIGGGLK GVVGK