| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2858 |
|---|
| Symbol | |
|---|
| ID | 3836298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3290935 |
|---|
| End bp | 3291804 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637826969 |
|---|
| Product | flagellin-like |
|---|
| Protein accession | YP_427942 |
|---|
| Protein GI | 83594190 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00447179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA ACATTACGCT TTCTTCCTCC ACGCGTTCGA ACCTGCTGGC GCTGACCCGG
ACCACCGATT TGATCGGTAG GACCCAGGAT CGTCTGTCCA CCGGCAAGGC CGTGAACAGC
GCCATCGACG ACGCGCTGTC GTTCTTCAAA GCCCGTAACC TCAATAGCCG CGCCACCGAT
CTTGCCACCA TCAAGAACGG CATCAGCGAA GGCATCCAGG TTCTGAAGAC GGCGACCGAC
GCCCTTGAGA ATGTCGAAGA CGTCCTGAAG CAGATGAAGG CCATCGCCGC CTCGGCGAAA
GCTACGGCCA GTGCCGACTC GACCACCCGC GCCAAGCTGT CGAGCCAGTT CAACGAACTG
CGCAGCCAGA TCGACCATCT GACCAATGAC GCTAACTACG GCGGCGTGAA CCTGATCAAG
TCGGGCGCCG ATACCCTGAC CGTCAAGTTC TCGGAATCGC CCTCGGCCTC CGACCGCAAG
CTGGTCATCA AGGGCATCGC CTCGAACGTG GACGGCACCT CGGGCATCAG CGTCTCTTCG
GCGCAGAATG CCGCGGCGGG TTGGGCCGAT ACCACCGTTT CGGTCTATGG CGGCGTCATC
GACAACGCGA TCAACCAAAT CGACTCGGCC CTGACCACGG TTCGTGACTC GGCTCAGACC
TTTGGTACCA ACGCGTCGAT GCTTCAGATC CGCGAGGATT TCACCTCCAC TCTGATCAAC
ACTCTGGAAG GTGGCGCCGC GGACCTGGTC AACGCCGATC TGAACAAGGA ATCGGCCAAC
ATGCTGTCGT TGAAGACCCG CCAGCAGCTC GGCACGATCT CTCTCTCGAT CGCTCAGCAG
TCCGAACAGG CCGTTCTGCG TCTGTTCTAA
|
|---|
| Protein sequence | MADNITLSSS TRSNLLALTR TTDLIGRTQD RLSTGKAVNS AIDDALSFFK ARNLNSRATD
LATIKNGISE GIQVLKTATD ALENVEDVLK QMKAIAASAK ATASADSTTR AKLSSQFNEL
RSQIDHLTND ANYGGVNLIK SGADTLTVKF SESPSASDRK LVIKGIASNV DGTSGISVSS
AQNAAAGWAD TTVSVYGGVI DNAINQIDSA LTTVRDSAQT FGTNASMLQI REDFTSTLIN
TLEGGAADLV NADLNKESAN MLSLKTRQQL GTISLSIAQQ SEQAVLRLF
|
|---|
| |