| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2822 |
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| Symbol | fliR |
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| ID | 3836262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3256988 |
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| End bp | 3257749 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637826933 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_427906 |
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| Protein GI | 83594154 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.104106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG CTTTTTTAAA CCAGAACCTT TTTCATTTTC TGCTGGTCTT CGTGCGGCTG
GGCACGGCCA TGCTGGTTCT GCCCGGGCTG TCGTCCACCT ATGTTTCGGT CAATATCCGC
ATCCTGCTGG CCGTGACCAT TACCCTGGTC GCCCTGCCAA CGGTGGGAGC GGCCCTGCCG
CCCGCTCCCG ATAACACGGC TTTCCTGGTG CTGCTGATCG CCGTCGAGGC GACGATCGGG
GTGTTTTTGG GCATGATGGC GCAGTTCCTG CTGGTGCCGG TCAGTTTCGC CGGCAATATC
ATGGGCTTTT CCACCGGCCT GATGATGGCC CAGGCCTTCG ATCCGACCAC CGCCCAGCAA
AGCGCCCTGA TCGCCGGCTT TCTGGGCGAG GTGGCGATGG TGATGGTCTT CGTCACCGGC
ATGCACCATT TGATGATCGA GGCGGTGGTC AACAGCTACG ACGCCTTTCC CCCGGGCCAG
ATGCCCGATA CTGGGGATAT GGTGCAGCTG CTGGTCACCA TCTTGTCCTC GGGCTTTCGC
CTGGGGCTGC AGCTGGCCGC CCCCTTCATC ATCTATGCCA TCATCTTCAA TGCCACGCTG
GGGGTGATCG CCCGGCTGAT GCCCCAGCTC AATGTGCTGT TCGTGGCCAT GCCCGCCCAG
ATCCTGTTCG GTTTGGCCCT GTTGATGACC ACCGTGCCCT TCCTGATCTA TTCTTTCCTG
GGGCATTTCG AGCGCGGGCT GATCAATCTG GCGATGCCTT GA
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| Protein sequence | MLDAFLNQNL FHFLLVFVRL GTAMLVLPGL SSTYVSVNIR ILLAVTITLV ALPTVGAALP
PAPDNTAFLV LLIAVEATIG VFLGMMAQFL LVPVSFAGNI MGFSTGLMMA QAFDPTTAQQ
SALIAGFLGE VAMVMVFVTG MHHLMIEAVV NSYDAFPPGQ MPDTGDMVQL LVTILSSGFR
LGLQLAAPFI IYAIIFNATL GVIARLMPQL NVLFVAMPAQ ILFGLALLMT TVPFLIYSFL
GHFERGLINL AMP
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