Gene Rru_A2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2818 
SymbolalaS 
ID3836258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3249244 
End bp3251895 
Gene Length2652 bp 
Protein Length883 aa 
Translation table11 
GC content67% 
IMG OID637826929 
Productalanyl-tRNA synthetase 
Protein accessionYP_427902 
Protein GI83594150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CGTCGGAAAT CCGCAGGACG TTCCTCGATT TCTTCGTCAA GAACGGACAT 
CAAGAGGTGG CCTCAAGCCC GCTGGTGCCG CTCAACGACC CGACATTGAT GTTCACCAAC
GCCGGCATGG TCCAGTTCAA GAACGTCTTC ACCGGCGCCG AAACCCGGCC CTATCACCGG
GCGACGACCT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAATGACCT CGATAACGTC
GGCTATACGG CGCGCCACCA TACCTTCTTT GAAATGCTGG GCAATTTCTC GTTCGGCGAT
TATTTCAAGG AACAGGCGAT CGATTTCGCT TGGCGGCTGA TCACCGAGGA ATACGCCCTG
CCCAAGGACC GCTTGCTGGT CACCGTCCAT ACCTCCGACG AGGACGCCGC CGGGCTGTGG
CGCAAGGTCG CCGGTCTGCC CGACGAGCGC ATCATCCGCA TTCCGACCAA TGATAACTTC
TGGGCGATGG GCGATACCGG CCCCTGCGGC CCCTGTTCGG AGATCTTCTT CGACCATGGC
CCCAAGGTCG CCGGCGGCCC GCCGGGCAGC GCCGATGAGA ACGGCGACCG CTTCATCGAG
ATCTGGAATC TGGTGTTCAT GCAGTTCGAG CAGCTGACGG TGGATCAGCG GGTCGCGCTG
CCCCGGCCGT CGATCGATAC GGGCATGGGG TTGGAACGGG TGGCCGCCGT TCTGCAAGGC
AAGCACGACA ACTACGACAT CGACCTGATG CGCGCCCTGA TCGAGGCGAT CGCCAGCGCG
GCGGGCACCG ATCCCGATGG TCCGCACAAG GTTTCCCACC GGGTGATCGC CGATCACCTG
CGCTCGGCTT GCTTCCTGAT CGCCGATGGC GTGCTGCCCA GCAACGAGGG TCGCGGCTAT
GTGCTGCGCC GGATCATGCG CCGGGCGATG CGTCACGCCC ATATGATGGG CTGCGTCGAT
CCGTTGATGT TCAAGCTGGT GCCGGCGCTC AACCGCGAGA TGGCCGACCA GTTCCCCGAG
CTCAATCGGG CCAACGCCCT GATCACCGAA ACCCTGAAGC TCGAGGAAAC CCGCTTCAAG
CAGATGCTCG ATCGCGGGCT GAAGCTGCTG GCCGAGGAAA CCGGCGATCT GGCGAGCGGC
GACAGCCTGC CCGGCCCGGT CGCCTTCAAG TTGTATGACA CCTATGGCTT CCCGCTCGAT
CTGACCCAGG ACGCCCTGCG GCCGCGCGGC ATCGGCGTTG ATACCGCCGG CTTCGACGCG
GCGATGGCCC GCCAGCGCGA GGATGCGCGC AAAAGCTGGA CCGGCTCGGG CGACCATGCG
ACCGAGGCGG TGTGGTTCGA TATCCGCGAC CGGGTCGGCG CCAGCGAATT CCTCGGCTAT
ACCAGCACCG ACGCCGAAGG CGCGATCGTC GCCCTGGTCG TTGACGGCAA GGTGGTGGAA
AGCGCGCCCG CCGATACCGA GGTGGCGGTG ATCGCCAATC AGACGCCGTT CTATGGCGAA
TCCGGCGGCC AGATGGGCGA TGCCGGCGAG ATCCGTCTGG CCGAGGGCGG CAAGGTCGTT
GTCCGCGACA CCGCTAAGAA GCTGGGCGCG CTGCATGTCC ATATCGGCCG CGTCGAGGGG
GCGACGATCC GCGTCGGTCA GGCCGCCCGC TTCGTTGTCG ATACCGAGCG CCGCGACGCC
CTGCGCAGCC ACCATTCGGC CACCCATCTG CTGCACGAGG CCCTGCGCCG GCGTTTGGGC
GAGCATGTGA CCCAGAAGGG CTCGCTGGTC GCCCCCGATC GCCTGCGCTT TGATATCAGC
CATCCCAAGC CGCTGTCGGC GGCCGAGATC CGCGTGGTCG AGGACGACGT CAACCGCGAG
ATCCGCGCCA ACGCCGAAAT CACCACCCAG ATCATGGACC CCGATTCGGC GATCGAAGCC
GGGGCGATGG CGCTGTTTGG CGAGAAATAC GGCGAGGAGG TGCGCGTGGT GTCGATGGGC
CGGCGCGAGC CCGGCGCCAA CCGGCCGTTC TCGGTCGAGC TGTGCGGCGG CACCCATGCC
CGGCGCACCG GCGACATCGG CTTTTTCAAG ATCATCGGCG AGGGCGCCGT GGCTTCGGGC
GTGCGCCGGA TCGAGGCGGT CACCGGTCAG GCGGCTTTCG AGCATATCGA GGCCCAGGAT
GATCTGGTCA GTGGCGCGGC GCAGCTTTTG AAGGTGACTC CCGCCGATCT GCCGGGCCGC
ATCCAGGCCC TGCTCGATGA CCGGCGCAGG CTGGAGCGCG ACTTGGCCGA CGCCCGGCGC
AAGCTGGCCA CCGGCGGCGG TGGCGCCGCC GCCCCGGCCG TGGTCGAGAT CAACGGCGTC
AAATGGGTCG GCCGCCTGCT GGAAGACGTT CCGGCCAAGG ACCTGAAGGG CATGGTCGAC
GAGGTGAAGA AGCAACTTGG CTCGGGCGTC GTCGCCCTGA TCGCCGTGGC CGACGGCAAG
GCCTCGCTGG TGGTCGGCGT CACCGAGGAT CTGGTCGGGC GCTTCGATGC CGTCGCCCTG
GTGCGCGCCG GGGCCGGGGC GATCGGCGGC AAGGGCGGCG GCGGCCGCCC CGACATGGCC
CAGGCCGGGG GCCCCGATGG CGCCCAGGCC GGCGCGGCCC TGGCGGCGAT CGAGGCGGCT
TTGGCCGGCT GA
 
Protein sequence
MSTTSEIRRT FLDFFVKNGH QEVASSPLVP LNDPTLMFTN AGMVQFKNVF TGAETRPYHR 
ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEQAIDFA WRLITEEYAL
PKDRLLVTVH TSDEDAAGLW RKVAGLPDER IIRIPTNDNF WAMGDTGPCG PCSEIFFDHG
PKVAGGPPGS ADENGDRFIE IWNLVFMQFE QLTVDQRVAL PRPSIDTGMG LERVAAVLQG
KHDNYDIDLM RALIEAIASA AGTDPDGPHK VSHRVIADHL RSACFLIADG VLPSNEGRGY
VLRRIMRRAM RHAHMMGCVD PLMFKLVPAL NREMADQFPE LNRANALITE TLKLEETRFK
QMLDRGLKLL AEETGDLASG DSLPGPVAFK LYDTYGFPLD LTQDALRPRG IGVDTAGFDA
AMARQREDAR KSWTGSGDHA TEAVWFDIRD RVGASEFLGY TSTDAEGAIV ALVVDGKVVE
SAPADTEVAV IANQTPFYGE SGGQMGDAGE IRLAEGGKVV VRDTAKKLGA LHVHIGRVEG
ATIRVGQAAR FVVDTERRDA LRSHHSATHL LHEALRRRLG EHVTQKGSLV APDRLRFDIS
HPKPLSAAEI RVVEDDVNRE IRANAEITTQ IMDPDSAIEA GAMALFGEKY GEEVRVVSMG
RREPGANRPF SVELCGGTHA RRTGDIGFFK IIGEGAVASG VRRIEAVTGQ AAFEHIEAQD
DLVSGAAQLL KVTPADLPGR IQALLDDRRR LERDLADARR KLATGGGGAA APAVVEINGV
KWVGRLLEDV PAKDLKGMVD EVKKQLGSGV VALIAVADGK ASLVVGVTED LVGRFDAVAL
VRAGAGAIGG KGGGGRPDMA QAGGPDGAQA GAALAAIEAA LAG