Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2811 |
Symbol | rimO |
ID | 3836251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3244402 |
End bp | 3245727 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826922 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_427895 |
Protein GI | 83594143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.185962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG ACCTTCAGAA GGTGGGCATC GTCAGCCTGG GCTGCCCCAA AGCCCTGGTC GATTCCGAAC GCATCCTCAC CCGCCTGCGG GCGGAAGGCT ATGAGGTGTC GCCCACCTAT GACGACGCCA ATGTGGTGAT CGTCAATACC TGCGGCTTCC TCGATTCGGC CAAGGCCGAA AGCCTGGAGG CGATTGGCGA GGCCATGGCC CAGAACGGCC GGGTGATCGT GACCGGCTGC ATGGGCGGCG ACGAGGCCGC CATCCGCAGC GCCCATCCCG GCGTTCTGGC GGTCACCGGA CCCCAGCAAT ACGAGCGCGT GGTCGCCGCC GTCCACGAGG CGGCGCCGCC GGCCCATGAC CCCTATCTTG ATCTGGTGCC GGCCGAGGGC ATCCGCTTGA CGCCCCGCCA TTACGCCTAT CTGAAGATCT CGGAAGGCTG CAATCACGGC TGCACCTTCT GCATCATCCC CGATCTGCGC GGCAAACTGG TCAGCCGCCC AGCCTCCAAG GTGCTGATGG AGGCCGAGAA GCTGGCCGAG GCCGGGGTGC GCGAGTTGCT GGTGATCAGC CAGGACACCA GCGCCTATGG CGTCGATCTG CGCCACGGCG AAAGCCCCTG GCACGGCGCG CCGGTCAAGG CCCGCATGAC CGAGCTGTGT AGCGCCCTGG GCGAACTGGG GATCTGGGTG CGTCTGCACT ATGTCTATCC CTATCCCTTC GTCGACGAGA TCATCCCGCT GATGGCCGAG GGCAAGATCC TGCCCTATCT GGATATCCCC TTCCAGCACG CCAGCCCGAA GATCCTTGAG GCGATGAAGC GCCCGGCCGC CCAGGACCGC ACGCTCGAGC GCATCCGCCG CTGGCGGACG ATCTGCCCCG ATATCGCGCT GCGCTCGACC TTCATCGTCG GCTTCCCCGG CGAAACCGAG GACGATTTCC AGCAGTTGCT CGACTGGATG GGCGAAGCCG AACTCGACCG CGTCGGCTGC TTCAAATACG AGGCGGTGGC CGGGGCCAAG GCCAATGCCC TGGCCGATGC CGTTCCCGAA GAGGTCAAGG AGGAGCGCTG GCACCGCTTC ATGGCCGCCC AGCAGGAGAT CAGCGAGCGC CGTCTGGCCC AAAAGGTCGG AACGGTGATC GAGGCGATCA TCGACGAAGT CGACGAGGAA GGCGCCATCG GCCGGACCAA GGGCGACGCC CCCGAGATCG ACGGCAGCCT GTTCCTCAAC GGCGAAACCA GCCTCGCCCC GGGCGATATC GTGCCCGTGC TCATCGAGCA TGCCGATGAA TACGACCTGT GGGGCTCCCT TGCCGGCAAG GACTGA
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Protein sequence | MNKDLQKVGI VSLGCPKALV DSERILTRLR AEGYEVSPTY DDANVVIVNT CGFLDSAKAE SLEAIGEAMA QNGRVIVTGC MGGDEAAIRS AHPGVLAVTG PQQYERVVAA VHEAAPPAHD PYLDLVPAEG IRLTPRHYAY LKISEGCNHG CTFCIIPDLR GKLVSRPASK VLMEAEKLAE AGVRELLVIS QDTSAYGVDL RHGESPWHGA PVKARMTELC SALGELGIWV RLHYVYPYPF VDEIIPLMAE GKILPYLDIP FQHASPKILE AMKRPAAQDR TLERIRRWRT ICPDIALRST FIVGFPGETE DDFQQLLDWM GEAELDRVGC FKYEAVAGAK ANALADAVPE EVKEERWHRF MAAQQEISER RLAQKVGTVI EAIIDEVDEE GAIGRTKGDA PEIDGSLFLN GETSLAPGDI VPVLIEHADE YDLWGSLAGK D
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