Gene Rru_A2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2811 
SymbolrimO 
ID3836251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3244402 
End bp3245727 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID637826922 
Productribosomal protein S12 methylthiotransferase 
Protein accessionYP_427895 
Protein GI83594143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG ACCTTCAGAA GGTGGGCATC GTCAGCCTGG GCTGCCCCAA AGCCCTGGTC 
GATTCCGAAC GCATCCTCAC CCGCCTGCGG GCGGAAGGCT ATGAGGTGTC GCCCACCTAT
GACGACGCCA ATGTGGTGAT CGTCAATACC TGCGGCTTCC TCGATTCGGC CAAGGCCGAA
AGCCTGGAGG CGATTGGCGA GGCCATGGCC CAGAACGGCC GGGTGATCGT GACCGGCTGC
ATGGGCGGCG ACGAGGCCGC CATCCGCAGC GCCCATCCCG GCGTTCTGGC GGTCACCGGA
CCCCAGCAAT ACGAGCGCGT GGTCGCCGCC GTCCACGAGG CGGCGCCGCC GGCCCATGAC
CCCTATCTTG ATCTGGTGCC GGCCGAGGGC ATCCGCTTGA CGCCCCGCCA TTACGCCTAT
CTGAAGATCT CGGAAGGCTG CAATCACGGC TGCACCTTCT GCATCATCCC CGATCTGCGC
GGCAAACTGG TCAGCCGCCC AGCCTCCAAG GTGCTGATGG AGGCCGAGAA GCTGGCCGAG
GCCGGGGTGC GCGAGTTGCT GGTGATCAGC CAGGACACCA GCGCCTATGG CGTCGATCTG
CGCCACGGCG AAAGCCCCTG GCACGGCGCG CCGGTCAAGG CCCGCATGAC CGAGCTGTGT
AGCGCCCTGG GCGAACTGGG GATCTGGGTG CGTCTGCACT ATGTCTATCC CTATCCCTTC
GTCGACGAGA TCATCCCGCT GATGGCCGAG GGCAAGATCC TGCCCTATCT GGATATCCCC
TTCCAGCACG CCAGCCCGAA GATCCTTGAG GCGATGAAGC GCCCGGCCGC CCAGGACCGC
ACGCTCGAGC GCATCCGCCG CTGGCGGACG ATCTGCCCCG ATATCGCGCT GCGCTCGACC
TTCATCGTCG GCTTCCCCGG CGAAACCGAG GACGATTTCC AGCAGTTGCT CGACTGGATG
GGCGAAGCCG AACTCGACCG CGTCGGCTGC TTCAAATACG AGGCGGTGGC CGGGGCCAAG
GCCAATGCCC TGGCCGATGC CGTTCCCGAA GAGGTCAAGG AGGAGCGCTG GCACCGCTTC
ATGGCCGCCC AGCAGGAGAT CAGCGAGCGC CGTCTGGCCC AAAAGGTCGG AACGGTGATC
GAGGCGATCA TCGACGAAGT CGACGAGGAA GGCGCCATCG GCCGGACCAA GGGCGACGCC
CCCGAGATCG ACGGCAGCCT GTTCCTCAAC GGCGAAACCA GCCTCGCCCC GGGCGATATC
GTGCCCGTGC TCATCGAGCA TGCCGATGAA TACGACCTGT GGGGCTCCCT TGCCGGCAAG
GACTGA
 
Protein sequence
MNKDLQKVGI VSLGCPKALV DSERILTRLR AEGYEVSPTY DDANVVIVNT CGFLDSAKAE 
SLEAIGEAMA QNGRVIVTGC MGGDEAAIRS AHPGVLAVTG PQQYERVVAA VHEAAPPAHD
PYLDLVPAEG IRLTPRHYAY LKISEGCNHG CTFCIIPDLR GKLVSRPASK VLMEAEKLAE
AGVRELLVIS QDTSAYGVDL RHGESPWHGA PVKARMTELC SALGELGIWV RLHYVYPYPF
VDEIIPLMAE GKILPYLDIP FQHASPKILE AMKRPAAQDR TLERIRRWRT ICPDIALRST
FIVGFPGETE DDFQQLLDWM GEAELDRVGC FKYEAVAGAK ANALADAVPE EVKEERWHRF
MAAQQEISER RLAQKVGTVI EAIIDEVDEE GAIGRTKGDA PEIDGSLFLN GETSLAPGDI
VPVLIEHADE YDLWGSLAGK D