Gene Rru_A2806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2806 
Symbol 
ID3836246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3237384 
End bp3238673 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content66% 
IMG OID637826917 
Producthypothetical protein 
Protein accessionYP_427890 
Protein GI83594138 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTTC ACATGCTGCG CCAGTCCTTC CTTGAAGGAC GCAAACGCAA GATTTTGGCG 
GCGGTGACGG TGGCCTTGGC CGCCACCTTG ATCACCACGC TGTTCACCAT CTCGCTTGAT
GTCGGCGACA AGATGGCCCG CGAGATGAAG TCCTATGGCT CCAACATCCG GGTTGTGCCC
AAAAGCGAGG CGGTGCCGCT GCGCATCGGC GGGGTCGATT ACAACCCGCT GAAGGGCCGC
GACTATCTTG ACGAGGCCGA TCTGCCCAAG ATGAAGGACA TCTTCTGGCG CAATAATATC
GTTGGTTTGG CGCCGACGTT GCGCACCCCG GTACGCCTTG GCGAGGAAAA GGCGGTGTCG
CTGATCGGCA CCTATTTCGA CAAGCCGATG CCCCTGCCCG ATGATCCCGA TTACCGCACC
GGCGTGCGCC AGACCAGCGG CTTCTGGAGC GTCGATGGCG CGTGGCCCCA AGATGACGCC
TCTGATCAGG CCTTGGTCGG CGTCACCCTG GCCGGCCGCC TGGGGCTGAC CAAGGGCGCC
ACGGTGAGCG TGGTCGACGA GGCCACCGGC ACAAGCCGGA GCTTCACGGT CAGTGGCCTG
CTGACCACCG GCGGGGTCGA GGACGACGCC GTCGTCGTGC CGTTGGCCGT GGTTCAGGAG
ATGGCCGGCT TGGCCGGCAA GGTGGCCGAG GTCGAGATCA GCGCCCTGAC CATCCCGGAA
AACGAGCTTT CGACCAAGGC GCGGCGCGAT ACCGAGAAGC TGTCGACCGC CGAATACGAC
ACTTGGTACT GCACCGCCTA TGTCAGTTCG ATCGCCCATC AGATCGAAGA GGCGGTGGTC
AACGCCTCGG CCCGGCCGAT CTGGCAGGTG GCGGCGGGCG AGGGGGCGGT GATCGGCAAG
ATCCAGGCCC TGCTGCTGGT CGTCGGCCTT GCCGCCTTCG TTTCGGCGGC GATGGGGGTG
TCGTCGATGA TGAACACGAC GATCACCGAG CGCGCCCGCG AGATCGGCCT GATGAAGGCC
CTGGGGGCGG CGGGTGGCGA GATTTATCTG CTGTTTTTGG GCGAGGCGGT GATCGTTGGC
GGGATCGGCG GGCTGGTCGG CTGGGGGCTG GGGCTGGGTT TGGCCCAGGG CGTCGGCCTG
ATGGTCTTCG GCTCGACCGT TACCATCGCC TGGGTCAGCG GCCCGCTGGT GGTGCTGGTT
TCCATCGCCA TGGCCCTGGC CGGATCGGCC CTGCCGGCCC GCGCCATCAC CGCCCTGATG
CCCGTCGAGG TGCTTCATGG TCGTCGTTAA
 
Protein sequence
MFFHMLRQSF LEGRKRKILA AVTVALAATL ITTLFTISLD VGDKMAREMK SYGSNIRVVP 
KSEAVPLRIG GVDYNPLKGR DYLDEADLPK MKDIFWRNNI VGLAPTLRTP VRLGEEKAVS
LIGTYFDKPM PLPDDPDYRT GVRQTSGFWS VDGAWPQDDA SDQALVGVTL AGRLGLTKGA
TVSVVDEATG TSRSFTVSGL LTTGGVEDDA VVVPLAVVQE MAGLAGKVAE VEISALTIPE
NELSTKARRD TEKLSTAEYD TWYCTAYVSS IAHQIEEAVV NASARPIWQV AAGEGAVIGK
IQALLLVVGL AAFVSAAMGV SSMMNTTITE RAREIGLMKA LGAAGGEIYL LFLGEAVIVG
GIGGLVGWGL GLGLAQGVGL MVFGSTVTIA WVSGPLVVLV SIAMALAGSA LPARAITALM
PVEVLHGRR