Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2806 |
Symbol | |
ID | 3836246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3237384 |
End bp | 3238673 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826917 |
Product | hypothetical protein |
Protein accession | YP_427890 |
Protein GI | 83594138 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.398602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTTC ACATGCTGCG CCAGTCCTTC CTTGAAGGAC GCAAACGCAA GATTTTGGCG GCGGTGACGG TGGCCTTGGC CGCCACCTTG ATCACCACGC TGTTCACCAT CTCGCTTGAT GTCGGCGACA AGATGGCCCG CGAGATGAAG TCCTATGGCT CCAACATCCG GGTTGTGCCC AAAAGCGAGG CGGTGCCGCT GCGCATCGGC GGGGTCGATT ACAACCCGCT GAAGGGCCGC GACTATCTTG ACGAGGCCGA TCTGCCCAAG ATGAAGGACA TCTTCTGGCG CAATAATATC GTTGGTTTGG CGCCGACGTT GCGCACCCCG GTACGCCTTG GCGAGGAAAA GGCGGTGTCG CTGATCGGCA CCTATTTCGA CAAGCCGATG CCCCTGCCCG ATGATCCCGA TTACCGCACC GGCGTGCGCC AGACCAGCGG CTTCTGGAGC GTCGATGGCG CGTGGCCCCA AGATGACGCC TCTGATCAGG CCTTGGTCGG CGTCACCCTG GCCGGCCGCC TGGGGCTGAC CAAGGGCGCC ACGGTGAGCG TGGTCGACGA GGCCACCGGC ACAAGCCGGA GCTTCACGGT CAGTGGCCTG CTGACCACCG GCGGGGTCGA GGACGACGCC GTCGTCGTGC CGTTGGCCGT GGTTCAGGAG ATGGCCGGCT TGGCCGGCAA GGTGGCCGAG GTCGAGATCA GCGCCCTGAC CATCCCGGAA AACGAGCTTT CGACCAAGGC GCGGCGCGAT ACCGAGAAGC TGTCGACCGC CGAATACGAC ACTTGGTACT GCACCGCCTA TGTCAGTTCG ATCGCCCATC AGATCGAAGA GGCGGTGGTC AACGCCTCGG CCCGGCCGAT CTGGCAGGTG GCGGCGGGCG AGGGGGCGGT GATCGGCAAG ATCCAGGCCC TGCTGCTGGT CGTCGGCCTT GCCGCCTTCG TTTCGGCGGC GATGGGGGTG TCGTCGATGA TGAACACGAC GATCACCGAG CGCGCCCGCG AGATCGGCCT GATGAAGGCC CTGGGGGCGG CGGGTGGCGA GATTTATCTG CTGTTTTTGG GCGAGGCGGT GATCGTTGGC GGGATCGGCG GGCTGGTCGG CTGGGGGCTG GGGCTGGGTT TGGCCCAGGG CGTCGGCCTG ATGGTCTTCG GCTCGACCGT TACCATCGCC TGGGTCAGCG GCCCGCTGGT GGTGCTGGTT TCCATCGCCA TGGCCCTGGC CGGATCGGCC CTGCCGGCCC GCGCCATCAC CGCCCTGATG CCCGTCGAGG TGCTTCATGG TCGTCGTTAA
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Protein sequence | MFFHMLRQSF LEGRKRKILA AVTVALAATL ITTLFTISLD VGDKMAREMK SYGSNIRVVP KSEAVPLRIG GVDYNPLKGR DYLDEADLPK MKDIFWRNNI VGLAPTLRTP VRLGEEKAVS LIGTYFDKPM PLPDDPDYRT GVRQTSGFWS VDGAWPQDDA SDQALVGVTL AGRLGLTKGA TVSVVDEATG TSRSFTVSGL LTTGGVEDDA VVVPLAVVQE MAGLAGKVAE VEISALTIPE NELSTKARRD TEKLSTAEYD TWYCTAYVSS IAHQIEEAVV NASARPIWQV AAGEGAVIGK IQALLLVVGL AAFVSAAMGV SSMMNTTITE RAREIGLMKA LGAAGGEIYL LFLGEAVIVG GIGGLVGWGL GLGLAQGVGL MVFGSTVTIA WVSGPLVVLV SIAMALAGSA LPARAITALM PVEVLHGRR
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