| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2782 |
|---|
| Symbol | |
|---|
| ID | 3836222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3215711 |
|---|
| End bp | 3216616 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826893 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_427866 |
|---|
| Protein GI | 83594114 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.427064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGT TGCGCCAACT CCGCTACATC GTCGCCGTAG CCGATACCCT GAATTTCCGC
CGTGCCGCCG AGGTTTGTCT GGTGTCGCAA CCCACGCTCA GCGTGCAGAT CGCCGAGGTC
GAAGCCTTCC TTGGGCTGAC GCTGTTCGAG CGCACTCGCC GCAGCGTGGT GCTGACGCCG
ATCGGCCGCG AAATCGCCGA ACGGGCGCGC GGCGTTCTGC GCGAGGCCAA TGAGATCGTC
GATCTGGCGC GCTCGCTGCG CGCTCCCCTG TCGGGGCCGC TGCGTCTGGG CGTCATCGCC
ACCCTCGGCC CCTATCTGCT GCCCTATGTG TTGTCGGCCT TCCGCGAAAA GCATCCCTCC
TTGCGCCTTT ACCTGCGCGA GGACCCATCG CTGCGCCTAG AGCGTCGGCT GCGGGCCGGT
GAGCTTGATC TGATCCTGGT CGATATGCCC ATCGACGATG CCGGCCTCGA CATCATGGAT
CTGTTTTTCG AGCCCCTATG GCTGGCCGCG CCCCCCGATC ACGCCCTGGC CGACAGGACG
CGGGTGAGCG TCGAGGATCT CGCCGGGCGC GACCTTTTGC TGCTCGAAGA GGGCCATTGC
CTGCGCGACG AGGTGCTTGA CCTCTGCCGG CGGGTGGGGG CGCGCGAACA TGGCGGCTTC
CAGGCGACCA GCCTTGACAC CCTGCGTCAG ATGGTGGCCA GCCGCATCGG TCTGGCCCTG
CTGCCCGATC TGTATGTCGC CGCCGAGGCC GCCCAGGATC CCAATATCCG GATGATTCCC
TTCAGCGCGC CGCCGGTCCG CCGAGTCGGT TTGGCATGGC GCAAAACCTC GGCGCGCGTA
GCCGAATTTC GCGAATTCGG CGCCTTTATC CTGGCCCGGT TGCCGGCCAG TCTCGCGGTT
CCGTGA
|
|---|
| Protein sequence | MFTLRQLRYI VAVADTLNFR RAAEVCLVSQ PTLSVQIAEV EAFLGLTLFE RTRRSVVLTP
IGREIAERAR GVLREANEIV DLARSLRAPL SGPLRLGVIA TLGPYLLPYV LSAFREKHPS
LRLYLREDPS LRLERRLRAG ELDLILVDMP IDDAGLDIMD LFFEPLWLAA PPDHALADRT
RVSVEDLAGR DLLLLEEGHC LRDEVLDLCR RVGAREHGGF QATSLDTLRQ MVASRIGLAL
LPDLYVAAEA AQDPNIRMIP FSAPPVRRVG LAWRKTSARV AEFREFGAFI LARLPASLAV
P
|
|---|
| |