Gene Rru_A2748 details

Gene Information

• Locus tag: Rru_A2748
• ID: 3836187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 3180985
• End bp: 3181680
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637826858
• Product: ABC transporter component
• Protein accession: YP_427832
• Protein GI: 83594080
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00767275
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTTC CTTTGGTCGA GGCGCGCAGC CTGTCCAAAA GCTTCGGCGA GGGCGAACTG 
GCCAGTCAGG TTCTCAAAAG GCTGAGTTTT GATATCAATG CGGGTGAGCG CGTCGCCCTG 
GTCGGTCCCT CGGGCTCGGG AAAATCCACC CTTCTGGCCG TGCTTGGCAC CTTGCTGGGG 
GCGACCTCGG GCGACTTGCG CATCCTTGGC CAGCCGATGA TCGGCCTGCC CGAAGCCGAG 
CTGGCGCGCT TTCGCAACCG TAATCTTGGC TTCGTCTTCC AGTTCCATCA CCTGCTGCCC 
GATTTCACCG CCCTGGAAAA CGTCCTGTTC CCCGCCGCCG CCGGCAAGGG CCGCGAGACC 
CGCCTCATGC GCGAGCGGGC CCGCGCCCTG TTGGTGCGCG TGGGCCTGGA AGACCGCGTC 
GATTACGGGG CGCGCAAATT ATCGGGTGGC CAGAAGCAGC GCGTCGCCCT GGCCCGCGCC 
CTGATCAACC GCCCGGCCCT GGTCCTGGCC GACGAACCCA CGGGCAATCT CGACAGCGGT 
CCGGCCGAAC AGGTGATGAA CCTGCTGGGC GAGATCAACG CCGAAGACGG CACCACCTTC 
CTGATCTCCA CCCACGACGC CGCCGTCGCC GCCCGCTGCA CCCGCCGCAT GGAACTGCTC 
GACGGCCGTC TGGTCGGCCA GGATCCGGCG GATTAG 

 

Protein sequence

MTLPLVEARS LSKSFGEGEL ASQVLKRLSF DINAGERVAL VGPSGSGKST LLAVLGTLLG 
ATSGDLRILG QPMIGLPEAE LARFRNRNLG FVFQFHHLLP DFTALENVLF PAAAGKGRET 
RLMRERARAL LVRVGLEDRV DYGARKLSGG QKQRVALARA LINRPALVLA DEPTGNLDSG 
PAEQVMNLLG EINAEDGTTF LISTHDAAVA ARCTRRMELL DGRLVGQDPA D