| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2718 |
|---|
| Symbol | |
|---|
| ID | 3836157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3141659 |
|---|
| End bp | 3144058 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637826828 |
|---|
| Product | DEAD/DEAH box helicase |
|---|
| Protein accession | YP_427802 |
|---|
| Protein GI | 83594050 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.370248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCG CCGACCTCGG CCTCAGTCCA GAAACCCTCC GGGCCATCGA GGAAGTGGGC
TATACAACGC CCACTCCCAT TCAGGTTCAG GCAATTCCCT ATGTTCAGAT GGGGCGCGAT
GTCTTGGGCA TCGCCCAGAC CGGAACGGGC AAAACCGCCT CGTTCACGCT GCCGATGATC
GACATCCTGG CCAGCGGCAA GGCCAAGGCG CGGATGCCGC GCTCGCTGAT CCTCGCCCCG
ACCCGGGAAC TGGCCACCCA GGTTTCCGAA AACTTCACCC TCTATGGCAA GTACCAGAAG
CTGTCGATGG CGTTGCTGAT CGGCGGCGAG TCGATGAACG AGCAGCAAAA GGTTCTTGAT
CGCGGCGTCG ACGTGCTGAT CGCCACCCCC GGGCGGCTGA TCGATCTGTT CGAACGCGGA
TCGATCCTGC TGCGCGACGT CAAGGTGCTG GTGATCGACG AGGCCGACCG CATGCTCGAC
ATGGGGTTCA TCCCCGATGT CGAACGCATC GTCGCCCTGC TGCCCAAAAT CCGTCAGACG
CTGTTCTTCT CGGCGACGAT GGACAAGGAA ATCCGCCGGC TTGCCGATGC CTTCCTGATG
AACCCCAAGG AAGTCCGCAT CGAACCCACC CAGAAGGTGG CCGAAACGGT GGAACAGGCC
CTGATCATGG TCAAGGCCTC GGAAAAGCGC GAGGCCCTGC GCCAACTTCT GCGGCGCGAG
ACGGTGACCA ACGCCTTCAT CTTCTGTAAC CGCAAGCGCG ATGTCGACGT GCTCTATAAG
TCGTTGTCGG GCCACGGCTT CGACATTCTG GCCCTGCATG GCGACATGCC CCAATACGTG
CGGACCGAGC GGCTGGAGAA GTTCAAGCGC GCCGAAGTCC AGTTGATGGT CTGTTCGGAC
GTGGCGGCGC GCGGCATCGA CGTGACCGAG GTTTCCCACG TCTTCAATTT CGACGTGCCG
ACCCACCCCG AGGATTACAT CCACCGCATC GGCCGCACCG GCCGGGCCGG CCGCCTCGGC
CGCGCCTATA CCCTGGCCAC CCCTGAGGAC GCCAAGTACC TGCGGGCCAT CGAAAACCTG
TTGGGCAAAA CCATTCCGCC CGACCCCCAA TTGGAGCTTT CAGACGTGGC CGTGGAGGAT
GTCGCCCTAG CCGTTGCCGA AGATGATCGC CGGCCCAAGC GTGGTGGCAA GGGCCGCCCC
GAACGCGGCG CCCGGCGGTC AGGCCGGGGA AGCGCCGACG CCGAACGCCC CCGTCCGCTC
GCCCCCGAGC GCGCGGCCAA TGATCAGGCC CCGGTCGAGC GCCCCGCCGT TGAAAAGACC
CTGGCCGAAC AGCCCGTCGC CGAGCGCCCG CCGGTCGAGC GCGGGCAGGC CGAGCGGACC
GCCGAACGCC CCTCCTCCGA CCGCACCAAT GAGCGTGCGT CCTCCGACCG CAGCAGTGAG
CGTGCGTCCT CCGAACGCAA CGGCGACGAT CGTGGCCGGG GTGGTCGTGG TCGCGATGAC
CGCTCGGCGG CGCGCGGTCG CCGGCCCCGG CGCTGGGAAG ATGATCCCCA GTCCGAAGTC
ATGGAAATGC GCATCGGCGA CGATGTGATC GGCTTTGGCG GCTTTACCCC CGCCTTCCTG
CTGGTGCCCT CGGTTCCCTT CAGCGATCCC GACGAGCTCG ACCGCGAGGC CCTGGCCGAG
GAAGCCCTGG CCGATGCCGG TTTGCTGGTC GAAGCCGAAG AGCCCGAAAA CGACTCCGAC
TTCGTCCCCG CCCCCGGCCT TGCCGCCCGC GAGATCGAGA CCGCCCCCAA GGCGCCGGTC
GCCGCCGAGA AGCCCGAGCG CGAAAAAGCC GAGCGCGAGA AGCCCAAGCG CAAGCGCGGC
GGTCGCCGGA CCAAGGGCGC GACCGATGGC GCCGACACCG CCCCGACGGC CGAGACGCTC
GCCGCGACGA CCGAAGGGAC CGATGCGCTC GCCGCAACGA GCGAAGGAAC CGATGCGCTC
GCCGCAACGA CCGAAGGAAC CGACGCCGTC GCCGAGCCCC TTTCCGACGA TGCGGCGCCG
ATGGTCGCCG AAGCGCCGGG GGCAGAGCCT GTCGTCGAAG CTCCGACGGT GGCTGAGGCC
GCCCCCGAAA AGCCCAAGCG CAAGCGCGCC GCACCGCGCA AAAAGGCCGA AGCGGCGGAA
ACCGTGACCA ACGAGGCCGC AGCAAGCCCC GAGGCCGAGG CGCCCGCCGA AAAGCCCAAG
CGCAAGCGCG CCGCCCCGCG CAAAAAGGCC GAAGCGGTGG GGGCCGAGGG TGACGAGACG
GTGGCGGTGG TCGCCGAAAA GCCCAAGCGC AAGCGCGCCG CCCCGCGCAA AAAGGCCGAA
GCCGCCCAGG CGGACGCCGA GGCCGAGGTC GCCGCGCCGA CGGAGCCGCG CGAAGACTAG
|
|---|
| Protein sequence | MTFADLGLSP ETLRAIEEVG YTTPTPIQVQ AIPYVQMGRD VLGIAQTGTG KTASFTLPMI
DILASGKAKA RMPRSLILAP TRELATQVSE NFTLYGKYQK LSMALLIGGE SMNEQQKVLD
RGVDVLIATP GRLIDLFERG SILLRDVKVL VIDEADRMLD MGFIPDVERI VALLPKIRQT
LFFSATMDKE IRRLADAFLM NPKEVRIEPT QKVAETVEQA LIMVKASEKR EALRQLLRRE
TVTNAFIFCN RKRDVDVLYK SLSGHGFDIL ALHGDMPQYV RTERLEKFKR AEVQLMVCSD
VAARGIDVTE VSHVFNFDVP THPEDYIHRI GRTGRAGRLG RAYTLATPED AKYLRAIENL
LGKTIPPDPQ LELSDVAVED VALAVAEDDR RPKRGGKGRP ERGARRSGRG SADAERPRPL
APERAANDQA PVERPAVEKT LAEQPVAERP PVERGQAERT AERPSSDRTN ERASSDRSSE
RASSERNGDD RGRGGRGRDD RSAARGRRPR RWEDDPQSEV MEMRIGDDVI GFGGFTPAFL
LVPSVPFSDP DELDREALAE EALADAGLLV EAEEPENDSD FVPAPGLAAR EIETAPKAPV
AAEKPEREKA EREKPKRKRG GRRTKGATDG ADTAPTAETL AATTEGTDAL AATSEGTDAL
AATTEGTDAV AEPLSDDAAP MVAEAPGAEP VVEAPTVAEA APEKPKRKRA APRKKAEAAE
TVTNEAAASP EAEAPAEKPK RKRAAPRKKA EAVGAEGDET VAVVAEKPKR KRAAPRKKAE
AAQADAEAEV AAPTEPRED
|
|---|
| |