| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2694 |
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| Symbol | |
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| ID | 3836129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3112980 |
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| End bp | 3117161 |
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| Gene Length | 4182 bp |
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| Protein Length | 1393 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637826800 |
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| Product | DNA-directed RNA polymerase |
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| Protein accession | YP_427778 |
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| Protein GI | 83594026 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC TCATGAAGAT CTTTGGTCAG GTCAGCGGCA CCCAGGCGTT CGACCAGATC
AAGATTTCCA TCGCCAGCCC GGAGAAGATC CGGTCGTGGT CCTTTGGTGA GATCAAGAAG
CCGGAAACCA TCAACTACCG GACGTTCAAG CCGGAAAGGG ACGGTCTGTT CTGCGCCCGC
ATTTTCGGGC CGATCAAGGA TTACGAGTGC TTGTGCGGCA AGTACAAGCG CATGAAATAC
CGCGGCATTA TCTGCGAGAA GTGCGGCGTT GAAGTCACGC TCTCGAAGGT GCGCCGCGAG
CGCATGGGCC ATATCGAACT GGCCGCCCCG GTCGCCCACA TCTGGTTCAT GAAGTCGCTG
CCGTCCCGCG TCGGGCTGCT CATCGACATG ACCCTGAAGG ACCTCGAGCG GGTTCTCTAT
TTTGAAAACT ACGTGGTGGT CGAGCCCGGC CTGACCCCGC TTAAGCTGCA CGAGATGCTC
TCGGAAGAGC AGTATCAGCG CGCGGTCGAG GAATACGGCG AGGATTCGTT CACCGCCGGC
ATCGGCGCCG AAGCCATCCG CGACATGCTG ATGAGCATCG ATCTTGAGAC CCTCAAGACC
GATATGAAGG TCGAGCTGCG CGACACCACC TCGGAAGCCA AGCGCAAGAA GCTGGTCAAG
CGGCTGAAGA TCGTCGACGC CTTCATCGAA TCGGGCTGCC GGCCCGAGTG GATGATCCTG
GAAGTCATTC CGGTGATCCC GCCCGAGCTG CGTCCGCTGG TCCCGCTCGA TGGCGGCCGT
TTCGCCACCT CCGACCTCAA CGACCTCTAC CGCCGCGTCA TCAACCGCAA CAACCGTCTG
AAGCGGCTGA TCGAACTGCG CGCTCCCGAT ATCATCATCC GCAACGAAAA GCGGATGCTT
CAGGAATCGG TCGACGCCTT GTTCGACAAC GGCCGTCGCG GCCGGGCGAT CACCGGGGCC
AACAAGCGGC CGCTGAAGTC GCTGTCGGAT ATGCTCAAGG GCAAGCAGGG TCGCTTCCGT
CAGAACCTGC TGGGCAAGCG CGTCGATTAC TCGGGGCGTT CGGTGATCGT GGTCGGACCG
GAGCTGAAGC TCCACCAGTG CGGCCTGCCC AAGAAGATGG CGCTCGAGCT GTTCAAGCCC
TTCGTCTATT CGAAGCTTGA GCAGTATCAC TACGCGACCA CCATCAAGGC GGCCAAGCGC
ATGGTCGAGA AGGAGCGTCC CGAGGTTTGG GACATCCTGG AAGAGGTCAT CCGCGAACAC
CCGGTGATGC TCAACCGCGC GCCGACGCTG CACCGCCTGG GCATCCAGGC CTTCGAGCCG
GTGCTGATCG AAGGCAAGGC GATCCAGCTT CATCCGCTGG TGTGCACCGC CTTCAACGCC
GACTTCGACG GCGACCAGAT GGCCGTCCAC GTCCCGCTGT CGCTCGAGGC TCAGCTCGAA
GCCCGCGTGC TGATGATGTC GACCAACAAC ATCCTCAGCC CGGCCAACGG CAAGCCGATC
ATCGTGCCGA CCCAGGATAT CGTGCTTGGC CTTTATTACC TGACCCTTGA TCGCGAAGGC
GAGAAGGGCG AGGGCATGGC CTTCGCCTCG CTCAACGAGA TCGAGCATGC CTTGCAGGCC
CGCGTCGTCA GCCTGCAGGC CCGGGTTAAG GCCCGCCTGC ATACGATCGA CGAGAACGGC
GCCCCGGTCA TTCGCACGGT CGAGACCACC CCGGGCCGCA TGCTGCTGTC GCGGCTGTTG
CCGCGCCACA CGGCGCTGCC CTTCTCGGTG ATCAACCGCC TGCTGCGTAA GAAGGACATC
ACCGACGTCA TCGATACCGT CTACCGCCAC TGCGGTCAGA AAGAGACGGT GATCTTCTGC
GACCGCGTCA TGCAGCTGGG CTATGCCCAC GCCGCGCGCG CCGGCATCTC GTTTGGCAAG
GACGATCTGG TCATTCCGCC GACCAAGGCC CAGCTCGTCG CCGACACCGA CGCCGAGGTC
AAGGAGTTCG AGCAGCAGTA CCAGGACGGC CTGATCACCC AGGGTGAAAA GTACAACAAG
GTGGTCGACG CTTGGTCCCA TTGCACCGAG CGCGTCGCCG ACGAGATGAT GAAGGAGATC
GCCAAGATCG AGCCGGGCAA GCCCGTCAAC TCGGTCTATA TGATGGCGCA CTCCGGCGCC
CGTGGTTCGG CCGCCCAGAT GAAGCAGCTC GCCGGTATGC GCGGCCTGAT GGCCAAGCCG
TCGGGCGAGA TCATCGAAAC GCCGATCGTG TCGAACTTCA AGGAAGGCCT GACCGTGCTG
GAGTACTTCA ACTCCACCCA CGGCGCCCGT AAGGGTCTGG CCGATACCGC CTTGAAGACG
GCGAACTCGG GGTATCTGAC CCGTCGTCTG GTTGACGTGG CCCAGGACGC GATCATCGTT
ATCGAGGATT GCGGCACCTC GCGCGGCATC ACCGCCATGC CGGTGGTCGA AGGCGGCCAG
ATCATCGCCT CGCTCGGCGA GCGGGTGCTG GGGCGGACCG CGGCCGAGGA CATCAAGGAC
ACCGACGGCA CCATCATCGT GCCGCTGGGC AAGATGATCG AGGAACACGA CGTCGAACTG
CTGGAAGAGG CGGGGATCGA GCAGGTGCGC ATCCGTTCGG TGCTGACCTG CGAGGCCGAG
ACCGGCATCT GCGGCAAGTG CTACGGCCGT GATCTGGCGC GCGGCACCAA GGTCAACATC
GGCGAGGCGG TGGGCGTCAT CGCCGCCCAG TCGATCGGCG AGCCGGGCAC CCAGCTGACG
ATGCGGACCT TCCACATCGG CGGCGCCGCC CAGCGTGGCG CCGAGCAGTC GAGCGTGGAA
GCGGCCTTCG ACGGCAAGAT CGTCATGGAG AACCGGGCGG TCGTCGGTAC CTCGGAAAAC
GTTCTGATCG TCATGTCGCG CAATTGCGAG GTGAAGATCA CCGACGAGGC CGGCCGCGAA
AAGGCCCGCT ACCGCATTCC CTATGGCTCC AAGCTGCTCA CCGATGAGGG CCGCATGGTG
ACCAAGGGCG ATCGCTTGGC CGAGTGGGAT CCCTACACGG TGCCGATCAT CACCGAGCGC
GAGGGTATCG CGATCTATAA CGATCTGGTC GAGGGCGTGT CCGTTCGCGA AGTCACCGAC
GAGGCCACCG GCATTTCGTC GAAGGTGGTG GTCGAGTGGA AGAACATGCC CAAGGGCACC
GACCTCAAGC CGCGCATCAC CTTGCGCGAT GACCGGGGCG AGGGCATCAC CCTGGCCAAC
GGTCTGGAAG CCCGCTACTT CATGAGCGTC GACACCATCT TGTCGGTCGA GAACGGCCAG
AGGGTGAAGG CCGGTGACGT GCTGGGCCGA ATTCCCCGCG AGGGATCGAA GACGCGTGAC
ATCACCGGTG GTCTGCCGCG CGTGGCCGAG CTGTTCGAGG CGCGCAAGCC CAAGGATCAC
GCCATCATCT CCGAGATCGA CGGTCGCGTC GAATTCGGCA AGGACTACAA GTCCAAGCGC
CGCCTGCTGG TGGTGCCCGA GGATGGCGAT CCGGTGGAAT ACCTGCTGCC CAAGGGCAAG
CATCTGACCA TTCAGGAAGG CGATTACGTC CGCAAGGGCG ATCCGCTGAT GGACGGCAAC
CCGGTTCCCC ACGACATCTT GCGCGTGATG GGCGTCGAGG CGCTGGCCAA TTACCTGATC
AAGGAAATCC AGGACGTCTA TCGTCTGCAG GGCGTGAAGA TCAACGACAA GCATATCGAA
GTGATCTCGC GTCAGATGCT GCAGAAGGTG GAAATCACCG AGCCCGGCGA CACCACCTTC
CTGGTGGGCG AGCTGATCGA TCGGACGGAC TTCCAGATCG AGAACGAGAA GACCCTGAAG
GAAAACGGCC GCCCGGCCAA TTCCATCCCG GTTCTGCAGG GCATCACCAA GGCCTCCTTG
CAGACCCACT CGTTCATCTC GGCCGCCTCC TTCCAGGAGA CCACCCGGGT GCTGACCGAG
GCCGCCGTGT CGGGCAAGAG CGACAGCCTG ATGGGTCTGA AGGAGAACGT CATCGTCGGC
CGCCTCATCC CGGCGGGAAC GGGCGCGATG ATGAATCGCC TGCGCGCCCT TGCCGCGACC
CGCGACAAGG AAATCGAAGA CTCGCGCGGC GCCGAGATGG TTCCGGTTCT GGGCGCGGCC
GAGTCTTTCA CGCCAAGACT GCCTGAACCG CCCGCCGAAT AA
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| Protein sequence | MNELMKIFGQ VSGTQAFDQI KISIASPEKI RSWSFGEIKK PETINYRTFK PERDGLFCAR
IFGPIKDYEC LCGKYKRMKY RGIICEKCGV EVTLSKVRRE RMGHIELAAP VAHIWFMKSL
PSRVGLLIDM TLKDLERVLY FENYVVVEPG LTPLKLHEML SEEQYQRAVE EYGEDSFTAG
IGAEAIRDML MSIDLETLKT DMKVELRDTT SEAKRKKLVK RLKIVDAFIE SGCRPEWMIL
EVIPVIPPEL RPLVPLDGGR FATSDLNDLY RRVINRNNRL KRLIELRAPD IIIRNEKRML
QESVDALFDN GRRGRAITGA NKRPLKSLSD MLKGKQGRFR QNLLGKRVDY SGRSVIVVGP
ELKLHQCGLP KKMALELFKP FVYSKLEQYH YATTIKAAKR MVEKERPEVW DILEEVIREH
PVMLNRAPTL HRLGIQAFEP VLIEGKAIQL HPLVCTAFNA DFDGDQMAVH VPLSLEAQLE
ARVLMMSTNN ILSPANGKPI IVPTQDIVLG LYYLTLDREG EKGEGMAFAS LNEIEHALQA
RVVSLQARVK ARLHTIDENG APVIRTVETT PGRMLLSRLL PRHTALPFSV INRLLRKKDI
TDVIDTVYRH CGQKETVIFC DRVMQLGYAH AARAGISFGK DDLVIPPTKA QLVADTDAEV
KEFEQQYQDG LITQGEKYNK VVDAWSHCTE RVADEMMKEI AKIEPGKPVN SVYMMAHSGA
RGSAAQMKQL AGMRGLMAKP SGEIIETPIV SNFKEGLTVL EYFNSTHGAR KGLADTALKT
ANSGYLTRRL VDVAQDAIIV IEDCGTSRGI TAMPVVEGGQ IIASLGERVL GRTAAEDIKD
TDGTIIVPLG KMIEEHDVEL LEEAGIEQVR IRSVLTCEAE TGICGKCYGR DLARGTKVNI
GEAVGVIAAQ SIGEPGTQLT MRTFHIGGAA QRGAEQSSVE AAFDGKIVME NRAVVGTSEN
VLIVMSRNCE VKITDEAGRE KARYRIPYGS KLLTDEGRMV TKGDRLAEWD PYTVPIITER
EGIAIYNDLV EGVSVREVTD EATGISSKVV VEWKNMPKGT DLKPRITLRD DRGEGITLAN
GLEARYFMSV DTILSVENGQ RVKAGDVLGR IPREGSKTRD ITGGLPRVAE LFEARKPKDH
AIISEIDGRV EFGKDYKSKR RLLVVPEDGD PVEYLLPKGK HLTIQEGDYV RKGDPLMDGN
PVPHDILRVM GVEALANYLI KEIQDVYRLQ GVKINDKHIE VISRQMLQKV EITEPGDTTF
LVGELIDRTD FQIENEKTLK ENGRPANSIP VLQGITKASL QTHSFISAAS FQETTRVLTE
AAVSGKSDSL MGLKENVIVG RLIPAGTGAM MNRLRALAAT RDKEIEDSRG AEMVPVLGAA
ESFTPRLPEP PAE
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