Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2668 |
Symbol | secY |
ID | 3836103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3097359 |
End bp | 3098702 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637826774 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_427752 |
Protein GI | 83594000 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTCCG CCGCCGAACA ACTCGCCTCT AATATGAACT TTGGCGTTTT CGCCAAGGCC ACCGAGCTGA AGAAGCGCAT CTGGTTTACG CTGGCGGCGC TGGTCGTTTA TCGGGTGGGC ACCTATATCC CGCTGCCCGG CATCGACCCC CAGGCGATGG CCGATGTCTT TTCGCGTAAT GGCGGGGGCA TCCTTGGCAT GTTCGACATG TTCGCCGGTG GCGCGCTGTC GCGTATGACC ATCTTCGCGC TCAACATCAT GCCCTACATC TCGGCCTCGA TCATCATGCA GCTGATGACC TCCATCAGCC CGCAGCTCGA AGCCCTGAAG AAAGAGGGCG AGTCGGGCCG CAAGCGCATC AACCAGTACA CCCGCTATCT GACGGTGCTG ATCACCGCCC TGCAGGCCTA TGGCATCGCC GTTGGCCTGG AGAGCATGAC CAGCTCGAGC GGGGCGGCCG TCCACGATGC CGGCATGTTC TTCCGCTTCA CCACCGTCGT CACCCTGATG GGCGGCACGC TGTTCCTGAT GTGGCTGGGC GAGCAGATCA CCGCGCGCGG CGTCGGCAAT GGCATTTCGC TGATCATTTT CACCGGCATC GTCGCCCAAT TGCCCCATGC CTTGGTCGGC ATGCTGGAAT TGGGCCGTAC CGGGGCGCTG TCGCCCGCCG TGATCCTGGG TATCCTGGTT CTGGCCGTCG GCGTCATCGC CTTCATCGTT TTCATGGAGC GCGCCCAGCG GCGGATTCTG ATCCAGTATC CCAAGCGCCA GCAGGGCAAT AAGATGTATG GCGGCGAAAG CAGCCATATG CCGCTCAAGA TCAATACCCC GGGCGTCATC CCGCCGATCT TCGCCAGCTC CATTCTGCTG CTGCCGATGA CCGCCGCCCA GTTCTCGGCC GGTCAGGGCC CCGAGTGGCT GACGACGATC ACCACTCTGC TTGGTCACGG CCAGCCGCTT TACATGGCGC TCTATGCCGC TTTGATCGCC TTCTTCGCCT TCTTCTATAC CGCTGTCGTC TTCAATCCCG AGGATACGGC GGAGAATCTG AAGAAGTACG GCGGGTTCAT TCCCGGTATC CGGCCCGGCC GCAATACCTC GGAATACCTC GACTATGTGC TGACCCGCTT GACGGCGGTC GGGGCGATCT ACCTGATCTT CATTTCGATC CTGCCTGAAT TTCTGATCTC GAAAGTCGGC GTGCCCTTCT ACTTCGGTGG CACCAGTCTG CTGATCGTGG TCACGGTGAC GATGGACACG GTCGCGCAGA TTCAGTCTCA CCTGTTGGCC CATCAGTACG AGGGCCTTAT CAAGAAGTCG AAGTTGCGGG GGAAACGCGG ATGA
|
Protein sequence | MASAAEQLAS NMNFGVFAKA TELKKRIWFT LAALVVYRVG TYIPLPGIDP QAMADVFSRN GGGILGMFDM FAGGALSRMT IFALNIMPYI SASIIMQLMT SISPQLEALK KEGESGRKRI NQYTRYLTVL ITALQAYGIA VGLESMTSSS GAAVHDAGMF FRFTTVVTLM GGTLFLMWLG EQITARGVGN GISLIIFTGI VAQLPHALVG MLELGRTGAL SPAVILGILV LAVGVIAFIV FMERAQRRIL IQYPKRQQGN KMYGGESSHM PLKINTPGVI PPIFASSILL LPMTAAQFSA GQGPEWLTTI TTLLGHGQPL YMALYAALIA FFAFFYTAVV FNPEDTAENL KKYGGFIPGI RPGRNTSEYL DYVLTRLTAV GAIYLIFISI LPEFLISKVG VPFYFGGTSL LIVVTVTMDT VAQIQSHLLA HQYEGLIKKS KLRGKRG
|
| |