| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2662 |
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| Symbol | |
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| ID | 3836097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3092389 |
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| End bp | 3093864 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637826768 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_427746 |
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| Protein GI | 83593994 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAG CGGGGGAGGA CCGGATGGAC CAATCGGGGC GGTGGGCCAG GGGCGTTCTG
GCCGGGGCGA GCGTCGCGGT CTTGCTGGCG TTCGGGGGAC CGGCGGCGGG GGCGGCCGAA
CAGGTGCCAG GGGCCGGGAC GGCCGAACAG GTGCCGATGG CGGCGGCCGA GATCAAGCTG
ACCTTCGCGC CGGTGGTCCG CGCCGTCGCT CCGGCGGTGG TCAATATCTT CAGCCAGCGC
GTCATCACCG AGTCGCAAGT TCCGCCGATG TTCGCCGACC CGCTGTTCCG CCGCTTCCTC
GAGGAGCGCG GCATGCTGGG CAAGCCGCGC GAGCGGGTTC AGCGGTCCTT GGGCTCGGGG
GTGATCTTGC GCTCCGAGGG CGTGGTGGTG ACCAATGCCC ATGTGGTCAA TGGCGCGAGC
GAAATCACCG TGGCCCTCAA CGATCGCCGG GAATTCCCCG CCGAACTGGT CGGGCTTGAT
CCGCGGGCCG ATCTGGCGGT GCTGCGGATC AAATCCGATA CGCCGCTGCC GTCGCTGGCC
CTGGCCGACG GCGAGCCGCC CGAGGTTGGC GATCTGGTTT TGGCCATCGG CAATCCCTTT
GGCGTCGGTC AAACGGTCAC CAGCGGCATC GTTTCGGCCC AGGCGCGGAC CACGGCGGGA
ATTTCCGATT ACCGCTTCTT CATTCAGACC GACGCGGCGA TCAACCCCGG CAATTCCGGC
GGCGCCCTGG TCGATCTGAG CGGCCGGCTG GTCGGCATCA ACACCGCCAT TTATTCGCGC
GACGGCGGCA GCGTCGGCAT CGGCTTCGCC ATTCCGGTCG AAATGGTGCG CTCGGTGGTC
GAGGGGATCT TGGAAGACGG CAAGGTCCGC CACCCCTGGC TGGGCGCCGA TGGCCAGTCG
GTGACGACCG AACTGGCAAG CCACATGGGC TTGGATCGCC CGCTGGGCGT CGCCATCACC
GATGTGGCCA AGGGCGGGCC GGCGGCCAAG GCCGGGCTTG CCGAAGGCGA TGTCATCCTG
GCGCTTGATG GCCGGCCGGT GTTCGAGGGG GAAACCCTGC GCTATCGCAT CGCCACCCAC
CGCCCCGGCG ACAAGGTGGT GTTGGGGATC CGCCGCGACG GCAAAGATAC CACCCTGGCC
GTCACCCTGG AGGCGCCGCC GGAGGATCCG CCGCGCGATA CCACCTTGCT CAAAGGCTCC
CATCCGTTCG ACGGGGCGGA GGTTTCCAAT ATGAATCCGG CCCTGGCCGA AGAACTGGGG
TTGGAGAAGG CCTCCCGGGG GGTGACGGTC ACCGGCCTGG GCGATGGCGT CGCCGCGCGG
ATCGGCATCC GCCCCGGGGA CCGGGTCATC GAGGTCAACG GCAAGGCCAT TGACGCGGTT
AGGGACCTGA AGGCGGCGAT CAGCAAACCC AGCCGGGTGT GGCAGGTGGT GGTCGATCGC
GACGGTCGGG CGGTGCGGCT GGTGCTCGGC GGCTGA
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| Protein sequence | MIKAGEDRMD QSGRWARGVL AGASVAVLLA FGGPAAGAAE QVPGAGTAEQ VPMAAAEIKL
TFAPVVRAVA PAVVNIFSQR VITESQVPPM FADPLFRRFL EERGMLGKPR ERVQRSLGSG
VILRSEGVVV TNAHVVNGAS EITVALNDRR EFPAELVGLD PRADLAVLRI KSDTPLPSLA
LADGEPPEVG DLVLAIGNPF GVGQTVTSGI VSAQARTTAG ISDYRFFIQT DAAINPGNSG
GALVDLSGRL VGINTAIYSR DGGSVGIGFA IPVEMVRSVV EGILEDGKVR HPWLGADGQS
VTTELASHMG LDRPLGVAIT DVAKGGPAAK AGLAEGDVIL ALDGRPVFEG ETLRYRIATH
RPGDKVVLGI RRDGKDTTLA VTLEAPPEDP PRDTTLLKGS HPFDGAEVSN MNPALAEELG
LEKASRGVTV TGLGDGVAAR IGIRPGDRVI EVNGKAIDAV RDLKAAISKP SRVWQVVVDR
DGRAVRLVLG G
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