| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2661 |
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| Symbol | |
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| ID | 3836096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3090356 |
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| End bp | 3092290 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637826767 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_427745 |
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| Protein GI | 83593993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.646845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGCGG AGGGCGCTTC GCTCGACGAC GCGGACACTC CCTCGATGGC GGCCCAGGCG
GCGGCTCGTC TGAGTGTGCT TGGGCTGCTG ATCGTTGGGC TGGTCAGTCT CGTCGGCTAT
TTTTTCGTTT TCGACTGGGA CAAGACGCAG GCCCTTGAGC GGCTGAGCGA TTTCCTGGTC
CAACGCCGTG CCCTGGAAAA CACCCTGTTT GACGAGGCCC AGCGCAACGG CGAGCGGTTC
CACGCGCTGT TCCTGGACGA CTATCACGGC GCTCCGCCCC TTGATGAGGC CGAATTCGGC
CGCTATTTCC AGCAAGACGG CACGGACGGC CCCTGGCGAA CGCGGCCGGA GTTCTATCAC
GGCCTGCGCG ACCGGGAAGG CGGGCTCATC GCCGGGGTCT CGGGCTTCAT CGCCGCCGGT
CGCGGAGCGG TGGCGCCCGA TCACGCCCGC CGGCTGGTCG TGTCGATGCG CTTGTTGGGG
CGTCTTGGCC CGGCGTGGAG CGGGGCTTTC GCCAATTCCA CGATTTCGAC GCCGGAAAAC
GGCAGCCTGC TTTATTGGCC GGGGGTGCCC TGGGGGCTGG AGGCCGCCGC CGATTTGCGC
CCGGCCGAGG GATCGGTCAT CGCCTCGACC TTGGTCGAGC ATAATCCGCA GCGGCGCCCG
GTCTGGACGG CGCTGTATCA CGATCTGACC GCCGATGCCT GGACAGTGAC CTATCAGCGT
CCGATCGACG AGGACGGACG TCATCTTGTC ACCTTCGGCC ATGACCTGCT GCTCAACGCC
ATGCTCAACC GGCTGGCCTC CGACCATCCG CCGGGGGCCA GCAGCTTTTT GCTGGGCGCC
GATGGCAGCC TGATCGCCCA TGCCGGCAGC GAGGAGCGCA TGGCCCATAT CGGTACCCAG
ATCGATCTGG AGACCCTGGG CGATCCGGCG CTGCTTCGGC GCTATCGGCT GCTGGTCGCC
GCCGTTGGTC AGAGGGGGGG CGACGGCGTG TGGATGGTCG AGGATCGCGA GGACCACGCC
TGGTTGGCGG CCACGGAGCT GTCGGGACCG GGCTGGTGGT ACGTGATTTC CTACCCCAAG
GAGGTCATCG CCGATCGCGC CCGGCGGGCG GCCAATCAGG TGGTGATCGG CGGGGTGGTC
TTGTCGTTCC TGCTGGTCGC CATGGTGCAA CTGGTGATGC GGCGGCGGGT GGCGCGGCCG
CTGGCCCAAT TGGCGCGGGC GGCCGGCGCG GTGGGTACCG GACAGACCGC TCTGGTGGCC
AGTGGCGGGC TTGACCTGCC GATCGGCGAG CGCAACGAAA TCGGTGTGCT GGCCCGGGCC
TTCCGCGAGA TGGCGATGCG GGTGCGCGAT CACGAGGTTA TTCTGGAACG CGAGATCGCC
AATCGGACGG GGGCCTTGGA AGAGGCGAAC CGCCGTCTGC ATTCGTTGAG CGAGACCGAT
GGTCTGACCG GGCTGTTCAA TCGTCGCGCC CTGGATCGCG ATCTGGCCGG CCACTGCGCC
CTGGCGCGCG GCGGCGGCGG GGCCGTGGCC CTGATCATGG TCGATATCGA TTATTTCAAA
GCCTATAACG ACGCCGAGGG GCATCTGGCC GGCGACGACG CCTTGCGCAA GGTCGCCCAA
CGCCTGCTTT CCATCCTGCG CCCCGGTGAT ACCATCTATC GCTATGGCGG CGAGGAGATG
GCCGTGCTGA TCGGTGGCGC CGGGGCCGAC GGCGCCGTCG GTGTCGCCCG GCGCATCGTC
GATGAGGTGG CGGCCCTGGC CATTCCCCAT CCGGCCAGCC CCTTTGGCGT CATCACGCTG
AGCGCCGGTC TGGCGGTGCT TCGCGGTGAG GCCACCCTGC CCAAGACCTT GATCAGTCGC
GCCGATGAGC AGCTTTACGC CGCCAAGCGC GGCGGCCGCA ATGTCCTGGT CGTCGCCCCG
ACCGATCCCG CTTGA
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| Protein sequence | MGAEGASLDD ADTPSMAAQA AARLSVLGLL IVGLVSLVGY FFVFDWDKTQ ALERLSDFLV
QRRALENTLF DEAQRNGERF HALFLDDYHG APPLDEAEFG RYFQQDGTDG PWRTRPEFYH
GLRDREGGLI AGVSGFIAAG RGAVAPDHAR RLVVSMRLLG RLGPAWSGAF ANSTISTPEN
GSLLYWPGVP WGLEAAADLR PAEGSVIAST LVEHNPQRRP VWTALYHDLT ADAWTVTYQR
PIDEDGRHLV TFGHDLLLNA MLNRLASDHP PGASSFLLGA DGSLIAHAGS EERMAHIGTQ
IDLETLGDPA LLRRYRLLVA AVGQRGGDGV WMVEDREDHA WLAATELSGP GWWYVISYPK
EVIADRARRA ANQVVIGGVV LSFLLVAMVQ LVMRRRVARP LAQLARAAGA VGTGQTALVA
SGGLDLPIGE RNEIGVLARA FREMAMRVRD HEVILEREIA NRTGALEEAN RRLHSLSETD
GLTGLFNRRA LDRDLAGHCA LARGGGGAVA LIMVDIDYFK AYNDAEGHLA GDDALRKVAQ
RLLSILRPGD TIYRYGGEEM AVLIGGAGAD GAVGVARRIV DEVAALAIPH PASPFGVITL
SAGLAVLRGE ATLPKTLISR ADEQLYAAKR GGRNVLVVAP TDPA
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