| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2604 |
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| Symbol | |
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| ID | 3836039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3027678 |
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| End bp | 3029714 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637826710 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_427688 |
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| Protein GI | 83593936 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.255704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGGAA AATTTCTCGC CGTTCAGCAG GCTTTGCGGG TCTCCCTGCT TAGCCTTGCG
GTGTCTTTGG GATTTCTGGG CATGCAAACG GTCTGGCTGG CCAGCGCCGC CGACCGCGAT
TATCTGATCT TGCGCGATCG GACGGCCTCG TCCTTGCAAT CGGGGTTGTC GAACGCCCTG
TGGAATTTCG ATGCGGAAAC CGCCAAGGCC ATCATCAGCG ATGCGCTGCG CGCCAATCCC
ATTCGCTCCA TTCACGTCAT CGATTCCAAT GGCCGGGTTT TCGCCGATGG CCAAAGCGCC
CAGCCGGTCG TCGCGCCCTC CCTATGGGAA AGCTATCTGG GTTGGCTGGT CGATCTGAAA
AGCGAGATGA CCCTTGATCT GCGCTTTTCG AGCCCGACCG ACGACCATTA CCAGGGGATG
GTCGTCGGCT TCGTCTTTAT CACCTTCGAT AAGGACCATT TCATCCGGGG GATCGCCGAT
CGACTGGCCG ATCAGGTGCT TGGCATTCTG GTCATCGTGC TGGTGGTGGC CCTGACCACC
AGCATCGTCT TCCACCTGTT CATCTCGCGG CCGATCATCC GCGTTGCCCG CGGCGTCGCC
GATGTTGATC CCGAAGATCC CGCCGCCACG GTTTTGACCG TTCCCCGCGC CCATCAACGC
AATGAAATCG GCCGCATGAC CAACCGGCTC AATCATCTGT TGGGCCGGCT GGCCGAGGTG
CAGGGGGAAC TGCGGCTGTT GGCCACCCGC GATCCGCTGA CCGATCTGCC CAACCGCAGC
CTGATCCTTG AGATGATGGA CGCGACGATC AACCGGGTCG CCCTGGACGG TGGCCGCTGC
GCGGTGATGT TTCTTGATCT CGACATGTTC AAGCACGTCA ACGACAGCCT GGGACACGAG
GCGGGTGATC TCATCCTCAA GGACATCGGA CGGCGGTTCG ACGCGGTGGT CGCCGGCCTG
GGGGCGGTGG GGCGGTTGGG CGGCGACGAG TTCGTCGTTC TCATTGACCG CTATGAGCGC
GAAGACGATC TGGCCCGCAT CGCCCGCCGG CTGATCACCA CGGTCAAACG GCCCATCGAG
GTCGATGGCA CCCTGGTCCA TTCAAGCACC TCGGTCGGCA TCGCCTGTTA TCCGGTCGAT
GGTGCCACCC CCCAGGGGCT GTTGCGCAAT GCCGATACGG CGATGTATGC GGTCAAGGCG
AGCGGGCCGG GCCAATGGGC GTTCTTCGAC CGCTCGATGA CCGAGAACGC CCTGGTGCGG
CTGCGGACCG AGGCGTCCTT GCGCTCGGCG ATCGAAAAGG GCCAATTCGT TTTGCACTAT
CAGCCCAAGC TTGATCTGCG CTCGAACCGT ATCAGCGGCT GCGAGGCCTT GATCCGCTGG
GACTTGAACG GAGATTTGGT GCCGCCGGGC CGCTTCATCT CGATCGCCGA GGAAACCGGC
ATGATCTATG ACATCGGGCT ATGGGTGCTG CGCGAGGCCT GTCAGGCGCA ACGGCGCTGG
CGCCGCCACG CCGGCGCGGT GCCGATCGCC ATCAATGTCT CGGTGCGCCA GCTCAAGGAC
GAGCGGTTCA TCGACGATTT CCTCGATATC ATCCAGGCGA GCGGCGCCGA TCCCGAACTG
CTGGAAGTCG AAGTGACCGA AAGCGCCCTG ATGAGCAGCA TCGAGGTCAG CGCCCATCTG
CTGCGCGAGA TGCGCAGCCA TGGCGTTCGC CTGTCGATCG ATGACTTTGG CACGGGGTAT
TCCTCGCTGG CCTATCTGAA GAACCTGCCC ATCGATATCC TCAAGATCGA CCGCAGTTTC
GTCAGCGATC TGCCCGAGGA AAGCTCGATC CCGCGCATGA TCATCGGGCT TGCCGGCCAG
ATGGGACTGC GCACGGTGGC CGAGGGGATC GAGACCGAGG GGCAATTGGC CTGGCTGCGC
GACAATGGCT GCGACATGAT CCAGGGCTTC CTGATCGAAA AGCCGCTGCC CGAGGCCGAC
TTCCTCCGCT TCGTCGACGC CTATCGGACC GCACGGGCCT TCCCCTCGGC GTCTTGA
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| Protein sequence | MLGKFLAVQQ ALRVSLLSLA VSLGFLGMQT VWLASAADRD YLILRDRTAS SLQSGLSNAL
WNFDAETAKA IISDALRANP IRSIHVIDSN GRVFADGQSA QPVVAPSLWE SYLGWLVDLK
SEMTLDLRFS SPTDDHYQGM VVGFVFITFD KDHFIRGIAD RLADQVLGIL VIVLVVALTT
SIVFHLFISR PIIRVARGVA DVDPEDPAAT VLTVPRAHQR NEIGRMTNRL NHLLGRLAEV
QGELRLLATR DPLTDLPNRS LILEMMDATI NRVALDGGRC AVMFLDLDMF KHVNDSLGHE
AGDLILKDIG RRFDAVVAGL GAVGRLGGDE FVVLIDRYER EDDLARIARR LITTVKRPIE
VDGTLVHSST SVGIACYPVD GATPQGLLRN ADTAMYAVKA SGPGQWAFFD RSMTENALVR
LRTEASLRSA IEKGQFVLHY QPKLDLRSNR ISGCEALIRW DLNGDLVPPG RFISIAEETG
MIYDIGLWVL REACQAQRRW RRHAGAVPIA INVSVRQLKD ERFIDDFLDI IQASGADPEL
LEVEVTESAL MSSIEVSAHL LREMRSHGVR LSIDDFGTGY SSLAYLKNLP IDILKIDRSF
VSDLPEESSI PRMIIGLAGQ MGLRTVAEGI ETEGQLAWLR DNGCDMIQGF LIEKPLPEAD
FLRFVDAYRT ARAFPSAS
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