| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2594 |
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| Symbol | |
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| ID | 3836029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3015117 |
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| End bp | 3016865 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637826700 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_427678 |
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| Protein GI | 83593926 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCT TGACGCGCCT ACTGCTTTTG GTCCTCGTGG TGGCCTGCGC CACGCCCGCT
TTCGCCGAGG AGAGGGGGGC AGATCACATC CTCGCCCGGG CTTTCCTCGA AGACCCGGCC
GGTGTTCTGA CGATCGACGA GGTCGCCCGG GGCGACTTCA CCCCCTTCGG GCCGAACTTC
TCGAAAGGCT ATACCCAATC GGTTTATTGG GTGCGCCTGC TTGTCCGCGC CTCCGCCGCG
CCCGAGAAGA CGGTGCTGTT CATCCGCCCA AGTTTTCTCA ACGAGGTCCG CTTGTTCTAC
CGGGATCGCG CGTCTCCCGA TGGATGGGCG ACGCGGGTGA GCGGAAACCG CTATCCCTTT
TCCGAGCGTG ATCGCAAGAG CGTCGCATTG GGCTTCGTCG TCGATGTGAC GCATCCGCAA
GAGGAATTCT ATCTGCGGAT AAAAACGAAT ACCCAAATGC AAATCGATGT TCAGGCGGTT
TCTCCCGACG TTGCGGCGGA TACGGATTCG CGGCGCGACA TGGTGATGGT GTTTTTCGTC
ACATCGATGA TTCTTATGAT ATTTTGGGGG GTCAACGAAT ATAGTTTTGA TAGATATAGA
ATTTTTGCTC TTTTTTGCAT TCATCAATTG GCGTTTACGC TGTTTGGAAT ATCGGCGGTC
GGCTATTTTT CTCCGTTTTG GGTTATGATT TTCCCTGGAA TAGTTGATCG TGCTTTCTAT
TTTCTATATA TGTCAATATC TTTTACATTG ATTTTATTCT GCCGAGAGCT TTTTAAGCCT
TATCAACCCC ACCCTGTGCT GGCAAAGGGG CTTGATTTGG CCCGCTGGGC CTTTCCGCTG
CAAATCATAG CGCTGATCGC CGGCTATGAT GCCCTGGCCG TGATCAGCAA TGCGCTTCTG
ATCAAGGGAG CGCTGTTCTA TTTCGTGTTT GTCGCCTTTT CTTTGAAGGT CGATCTCGAT
CCGACGCGGA GGACCTTGAG GATTTTCTTC ATCGGGATCG CCCTGATCAA TCTGATCTTC
TGGATGACGC CACGGGTTGG CGGCGAGTTG AAATGGTTGG GGTTGAGCGC GGTTCAGGCC
TTGGTGATCG ACGGGTTCGT CATGGGGATT CTGTTCGCCT GGCTGGCCCA TGGGCGGGGC
CGGCAAGTCC GCGAGGACGC CCAGCGCAAG ATCCGGCTTG TCAAGGAAAG CTATCTTGCG
GAACGCGATC TGAAGGCCCG GGCCGAGCGG GAAGCCAGGG TCGATTATCT GACGGGCGTG
TTAAACCGCC GCTCCTTTTT CGAGTTGGCC GAGGGGGAAT TGGCGCGATC AATCCGCTTT
GGGCGGCCTT TGGCTGTTTT GATGATCGAT ATCGACTATT TCAAAGCGGT CAATGACACC
TGGGGGCACG GCGTCGGCGA TGAGGTGTTG CAAAACGTCG CCGGGCTGAT CGGCCAGACC
CTGCGCGGCG CCGATATTTT CGGCCGCACC GGCGGCGAGG AATTCACCGC CGTGATCGTC
GAGGCCAGCG GATCGGAGGC CCTGGAGGTC GCCCAACGGC TTTGCGCCGT GGTGGCCCAA
GGCAAGATTG TTGGCCCCGG GGGGGAGGCG ATCGGCGTCA CCCTGTCGAT CGGCGTCAGT
CTGTTGCGCG GGCGCGACAT GGCCTTCGAG ATCCTCTCAA GGGAGGCCGA CCAAGCCATG
TATGGCGCCA AACGGGCGGG ACGCAACCGG GTCGTGGTTC ATCGGGACGC CTGGGGCGCG
CTCGGCTAG
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| Protein sequence | MLALTRLLLL VLVVACATPA FAEERGADHI LARAFLEDPA GVLTIDEVAR GDFTPFGPNF
SKGYTQSVYW VRLLVRASAA PEKTVLFIRP SFLNEVRLFY RDRASPDGWA TRVSGNRYPF
SERDRKSVAL GFVVDVTHPQ EEFYLRIKTN TQMQIDVQAV SPDVAADTDS RRDMVMVFFV
TSMILMIFWG VNEYSFDRYR IFALFCIHQL AFTLFGISAV GYFSPFWVMI FPGIVDRAFY
FLYMSISFTL ILFCRELFKP YQPHPVLAKG LDLARWAFPL QIIALIAGYD ALAVISNALL
IKGALFYFVF VAFSLKVDLD PTRRTLRIFF IGIALINLIF WMTPRVGGEL KWLGLSAVQA
LVIDGFVMGI LFAWLAHGRG RQVREDAQRK IRLVKESYLA ERDLKARAER EARVDYLTGV
LNRRSFFELA EGELARSIRF GRPLAVLMID IDYFKAVNDT WGHGVGDEVL QNVAGLIGQT
LRGADIFGRT GGEEFTAVIV EASGSEALEV AQRLCAVVAQ GKIVGPGGEA IGVTLSIGVS
LLRGRDMAFE ILSREADQAM YGAKRAGRNR VVVHRDAWGA LG
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