Gene Rru_A2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2570 
Symbol 
ID3836005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2988697 
End bp2989965 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content66% 
IMG OID637826676 
Productcysteine desulfurase 
Protein accessionYP_427654 
Protein GI83593902 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGA GCAGCACGGC GGCGCGCGAG CCGCACCCAG GCGACGACAG CCCTTATGAC 
GTGGAGGCGA TCCGCGCCGA TTTTCCAATC TTCGGCACCC AGGTCCATGG GCAGCCGCTG
ATCTATCTCG ATAGCGGCGC CTCGGCCCAG AAGCCGCGCG CCGTGATCGA TGCCATGCGT
TTGATGTATG AGGGCGAATA CGCCAACGTC CATCGCGGCG CCTATTGGCT GTCGGAGCGG
TCGACCACGC GCTACGAGGA AGCCCGCCAG ACCGTGCGCG GCTTCATCAA CGCCGCCCGG
TCGGAGGAGG TGGTCTTCAC CATGGGGGCG ACCGACGCCA TCAATCTGGT CGCCTATAGC
TTCGGCCGGG GTCTGCTCCA GGCCGGCGAT GAGATCATCA TCAGCGCCCT TGAGCACCAT
TCCAACATCG TGCCCTGGCA GATCCTGCGC GACGAGCGCG GCATCGTGTT GAAGGTCTGC
CCGATCACCG ATGCCGGCGA CCTTGATCTT GGCGCCCTGG AAACGCTGCT TGGCCCGCGC
ACCAAGCTGG TGGCGATGGC CCATACCTCG AATGTTCTGG GCACCATCTT GCCGGTCGAG
ACCATCATCA AGATGGCCCA TGGCGTTGGC GCCCGGGTGC TGCTTGACGG CTGTCAGGCC
GTCGTTCACA CCGCCGTCGA CGTTCAGGCG CTCGATGTCG ATTTCTATGC CTTTTCCGGC
CACAAGCTGT ATGGCCCGAC CGGCATCGGC GTGCTCTACG CCAAGCACGA GTTGCTCGAG
GCCATGCCGC CCTTCCGCGG CGGCGGCGAC ATGATCGCCA GCGTGAGCTT TGAGCACTCG
GTCTGGGCCG AGCCGCCGGC CAAATTCGAG GCGGGAACGC CGCCGATCGT CCAGGCGGTC
GGGCTGGCCA GCGCCATCGA CTATGTCTCG GCCATCGGCC TTGCGCGCAT CGCCCGCCAC
GAGGCCGATC TGCTGAACTA TGCCACCCAG AAGATGACGG TCCTTCCCGG GCTGACCATC
CATGGCACCT CGACCCGCAA GGCAGCGGTG ATCTCGTTCA CCATGGATTG CGCCCATCCC
CACGATATGG CGACCCTGCT CGATCGCTCG GGCGTGTGCA TCCGGGTCGG CCATCATTGC
GCCCAGCCGC TGATGGCGCG TCTGGGCGTC AGCGCGACGG CGCGGGCCTC TTTCGCCCTG
TACAACACCC GCGCCGATGT CGACGCCTTC GTCAAGGCGC TGGAGAAGGT TCGCGCCTTC
TTCGCCTGA
 
Protein sequence
MMASSTAARE PHPGDDSPYD VEAIRADFPI FGTQVHGQPL IYLDSGASAQ KPRAVIDAMR 
LMYEGEYANV HRGAYWLSER STTRYEEARQ TVRGFINAAR SEEVVFTMGA TDAINLVAYS
FGRGLLQAGD EIIISALEHH SNIVPWQILR DERGIVLKVC PITDAGDLDL GALETLLGPR
TKLVAMAHTS NVLGTILPVE TIIKMAHGVG ARVLLDGCQA VVHTAVDVQA LDVDFYAFSG
HKLYGPTGIG VLYAKHELLE AMPPFRGGGD MIASVSFEHS VWAEPPAKFE AGTPPIVQAV
GLASAIDYVS AIGLARIARH EADLLNYATQ KMTVLPGLTI HGTSTRKAAV ISFTMDCAHP
HDMATLLDRS GVCIRVGHHC AQPLMARLGV SATARASFAL YNTRADVDAF VKALEKVRAF
FA