Gene Rru_A2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2567 
Symbol 
ID3836002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2986624 
End bp2987817 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content65% 
IMG OID637826673 
Productdiguanylate cyclase 
Protein accessionYP_427651 
Protein GI83593899 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGATA CGACGACGAT GATGCTGGTG CTTGGACTGG GCAATCTGCT GTTTGGTCTG 
ACCATGGCCG CCTACCGCCA GCCCGCCGCC GATCATCGGG TGATGCGGCT GTGGATCGCC
GCCCAGGTTT TGAAGGGGAT CGGCACCCTT CTTGTCACGC TGCGCGGCGA GGTCGGACTG
AGTTTGAGCA TCTTCGGCGG CAACTCGCTG ATCTTCATCG GCTATGGCCT GGAGGTCGCC
GCCTATCGCG CCTATGCCAA GCGCCCCAAT GCCGATGCCT TGCTGCCCTT GCTGATCGTC
GGCTATCTGG TGCTGTTCAA TGGCGCGGCG GGGATCACCC CGCCCGATGC GCCCCGCAAT
CATCTGTTTT TCCTGTCCTC GGCGATGCTC GCCAGTCTGG GCTTTCTAAA CTGCTGGTTC
TTGCTGCGGG CCAAGCGCCC GCCCTCGCCG GTCAAGACCT TGTTGATCTC CAGCAATGCC
CTTCTGGGCT TGGCGGCCGT GGGGCGGGCG GTGGGCAGCC TGCTCGCCGG GCCGCTGTCG
CCCTTCGCCA ATTCGCCGAC CCATCTGGTG GTCTATGGTT TGGCCTATGC CTTCATGATC
ACCAACGGCT TTGGCTTTCT TCTGTTGGTC AAGGAGGATA CCGACGCCGC CTTGCGACGG
CTGGCCGATA CGGACCAGAT GACCGGTCTG GCCAACCGCC GGCACTTCCT GACGGCAAGC
CAGGAGGCCT GGAAACTGGC CGGGCGGCTG GGGCGGCCGA CGGCGCTGAT GATGTTCGAT
GTCGATCATT TCAAGCAGGT CAACGATAGT CAGGGTCATG CCGCCGGCGA TGCGGCGCTG
GTCGATCTGG CGCGGAACGT TCGCGAGGTC CTGCGCGATA TCGATATTTT CGGGCGCATG
GGCGGCGAGG AATTCGCCAT CACCCTGCCG GGCTGCGATC TGGTGGCGGC GGCCGTGATC
GCCGAGCGCG TCCGCCGCGC CGTGGCCGAG AGCCGGGGCG AGGGGCCAGC GATCACCATC
AGCCTGGGAC TGACGATTCT GGTCGCCGGA GAGCCTTTTG ACACGGCGCT GAAGCGCGCC
GACCACGGCC TGTACCAAGC CAAGGCGGCT GGCCGCAACC GGGTATGCTG CGTTCCCGCT
CCCCAGGGCT TGGCCAGCGT GGAGGCCGAA GCACCGATTT CCCTGGCGGG GTAG
 
Protein sequence
MIDTTTMMLV LGLGNLLFGL TMAAYRQPAA DHRVMRLWIA AQVLKGIGTL LVTLRGEVGL 
SLSIFGGNSL IFIGYGLEVA AYRAYAKRPN ADALLPLLIV GYLVLFNGAA GITPPDAPRN
HLFFLSSAML ASLGFLNCWF LLRAKRPPSP VKTLLISSNA LLGLAAVGRA VGSLLAGPLS
PFANSPTHLV VYGLAYAFMI TNGFGFLLLV KEDTDAALRR LADTDQMTGL ANRRHFLTAS
QEAWKLAGRL GRPTALMMFD VDHFKQVNDS QGHAAGDAAL VDLARNVREV LRDIDIFGRM
GGEEFAITLP GCDLVAAAVI AERVRRAVAE SRGEGPAITI SLGLTILVAG EPFDTALKRA
DHGLYQAKAA GRNRVCCVPA PQGLASVEAE APISLAG