Gene Rru_A2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2520 
Symbol 
ID3835954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2929751 
End bp2932003 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content71% 
IMG OID637826628 
Productpenicillin-binding protein 1A 
Protein accessionYP_427607 
Protein GI83593855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCCT CGCCTTCTGA TCGCCTGTCG GGCAACCGCC GTCCCGAAGA CATCGACCCG 
CCCGAAGCCC CCCGCCCCCC TCGCCGACCG GCTTTGCGGC ACCCGGGACG GATCGCCCTG
GCGATCGCCG GCGTGGTTCT GGCGCTTGGC GTCCTTGTGC TGGCGATCAA CCTCTACACC
ATGCCGCTGT CGCCCAGCTT CCAGGAGCCC GAGCGTTCGG GGTTTCTGAT CGCCGACGCG
GAAGGCACGG TGGTGGCGAC GCGGGGGGTC ACCGCCGGCC GGCCAGTCGC CCTGGCCGAG
ATGCCCGCTT CGCTGGTCAA CGCGGTGATC GCCTTCGAAG ACCGCCGCTT CCGCGACCAT
TGGGGCGTCG ATCCGAGGGG CATCGCGCGG GCGATCTGGG TCAATCTGCG CTCGGGCGGA
CGGACGCAAG GGGCCAGCAC CCTGACCCAG CAACTGGTCA AGAACACCCT GCTCACCCCG
GAAAAGACCT TCACCCGCAA GATCCAGGAG GCCATGCTCG CCCTGTGGAT CGAGCGCAAG
CTGACCAAGG ACGAGATTCT AGAACGCTAC CTCAATTCGC TGTATCTCGG CGCCGGCTCC
TATGGCGTCG ATGCCGCCGC CCGGCGTTAT TTCAACAAGC CGGTGACCGA TCTGTCGCTG
GCGGAATCGG CGATGATCGC CGGATTGATC CAGGCCCCGG CCCGCACCGG CCCGACCACG
GCCCTTGATG TCGCCCGCCA GCGCGCCGAA CTGGTTCTGG ACGTGATGCG CGACCAGGGA
CTGATCGGCG CCGACGAGGC GACCTGGGCC AAGGCCCATC CCGCCTCGCT CGCCGTTCCG
CCGGTCGAAC TGCCGGCCTA TGGCGCGGTG TCGGACTGGA TCGCCGATGA GGCGCGCAAG
GCCCTGGGGC CGCTGTCGGG CGACTTCCTG GTGGTCAGCA CCCTTGATCG CCGGCTGCAG
GTGCTGGCCC AGCAGACGAT CCAGGAGGGA ATGGCCGCCG AGGGCGCAGG CCTGCGCGCC
ACCCAGGCCG CCCTGGTGGC GATGGCCCCC GATGGCCGGG TCCTGGCCAT GGTCGGCGGT
CGCGACTATC AGGAAAGCCA GTTCAATCGC GCCGTCCAGG CCCGCCGCCA GCCCGGTTCG
ATCTTCAAGC TGTTTGTCTA TCTTACGGCG CTGTCGAACA ACTGGCGCCC CGATGACCCG
ATCGACGACA CGCCGCTGAC GATCGACGGC TGGAGCCCCG AGAATTATGG CGGCGGTGCC
GGCCATGGCA GCGTGCCGCT GCGCGTCGCC TTCGCCCATT CCTACAATCT GGCCGCCGTC
CGCCTGCAAG AGGCGGTGGG CCGCGAGGCG GTGATCGCCA CGGCGCGATC GATGGGATTG
AAGGACGATC TCCAACCTTT GCCCAGTCTG GCCCTTGGCA CCTTCCCCGC CACCTTGCTT
GATCTGACCA GCGCCTTCGC CGCCGTCGCC GCCGACCGTG CCACCGTCCA GCCCCGGGTG
ATCGAGGTTC TGCGCACCCC GGGCAGTGGC GAGATCCGCC CGCCGGTGCG CCAGTCGGGC
CGGGCGCCCT GGCCGCGCGC CAGCGCCCTT GATCTGCTCA ACGCCGTTGT CACCCAAGGG
ACCGGACGGG CCGCCGCCCT GGGGGTGCCG ACCTACGGCA AGACCGGCAC CACCCAGGAC
AACCGCGACG CCTGGTTCAT CGGCTTCGCC GGCAATCTGG TGATCGGCGT CTGGGTCGGC
AATGACGACG AAACGCCGAT GACCGGCATC AGCGGCGGCG GCCTGCCGGC CAAGCTGTGG
CAAAGCTTCG CCGCCCGCGC CCTGGCCGGC GGGGTCGCGG GCAGCGCCCC GGCCGCGCCG
ATCGCCGCCG CCACCACCGC CACCCTCCCC GCCGCCGCTC CGCCCGCCCC CACCCCGGCG
CCGGCCGTCC CGTCGCGCCA ACCGTTCTCG GCCGTGCCCG AGGCGGTGGT CGATACCGGA
ACCTTGCGCC TGGGCGGGCG GGTGGTTCGC CTTGAAGGGG TGAAGGGCCT CACCGGCCGT
CCGGCCCGCG ATATGGCGGG CTATATCGGC GATCGCTCCG TCACCTGCCG CCCGGCGGGA
CGCGAGCGCT GGCGCTGCGA TGTCGAAGGC TGGGATCTGT CGGAAGTGGC CTTGTTCAAC
GGCGGCGCCC GCGCCACCGC CGACGCGCCG GCCGATCTGG TCGCCGCCGA ACGCAAGGCC
CGCCAAGCCG GCCGGGGTGT CTGGGGGCGC TGA
 
Protein sequence
MIPSPSDRLS GNRRPEDIDP PEAPRPPRRP ALRHPGRIAL AIAGVVLALG VLVLAINLYT 
MPLSPSFQEP ERSGFLIADA EGTVVATRGV TAGRPVALAE MPASLVNAVI AFEDRRFRDH
WGVDPRGIAR AIWVNLRSGG RTQGASTLTQ QLVKNTLLTP EKTFTRKIQE AMLALWIERK
LTKDEILERY LNSLYLGAGS YGVDAAARRY FNKPVTDLSL AESAMIAGLI QAPARTGPTT
ALDVARQRAE LVLDVMRDQG LIGADEATWA KAHPASLAVP PVELPAYGAV SDWIADEARK
ALGPLSGDFL VVSTLDRRLQ VLAQQTIQEG MAAEGAGLRA TQAALVAMAP DGRVLAMVGG
RDYQESQFNR AVQARRQPGS IFKLFVYLTA LSNNWRPDDP IDDTPLTIDG WSPENYGGGA
GHGSVPLRVA FAHSYNLAAV RLQEAVGREA VIATARSMGL KDDLQPLPSL ALGTFPATLL
DLTSAFAAVA ADRATVQPRV IEVLRTPGSG EIRPPVRQSG RAPWPRASAL DLLNAVVTQG
TGRAAALGVP TYGKTGTTQD NRDAWFIGFA GNLVIGVWVG NDDETPMTGI SGGGLPAKLW
QSFAARALAG GVAGSAPAAP IAAATTATLP AAAPPAPTPA PAVPSRQPFS AVPEAVVDTG
TLRLGGRVVR LEGVKGLTGR PARDMAGYIG DRSVTCRPAG RERWRCDVEG WDLSEVALFN
GGARATADAP ADLVAAERKA RQAGRGVWGR