| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2520 |
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| Symbol | |
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| ID | 3835954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2929751 |
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| End bp | 2932003 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637826628 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_427607 |
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| Protein GI | 83593855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCCT CGCCTTCTGA TCGCCTGTCG GGCAACCGCC GTCCCGAAGA CATCGACCCG
CCCGAAGCCC CCCGCCCCCC TCGCCGACCG GCTTTGCGGC ACCCGGGACG GATCGCCCTG
GCGATCGCCG GCGTGGTTCT GGCGCTTGGC GTCCTTGTGC TGGCGATCAA CCTCTACACC
ATGCCGCTGT CGCCCAGCTT CCAGGAGCCC GAGCGTTCGG GGTTTCTGAT CGCCGACGCG
GAAGGCACGG TGGTGGCGAC GCGGGGGGTC ACCGCCGGCC GGCCAGTCGC CCTGGCCGAG
ATGCCCGCTT CGCTGGTCAA CGCGGTGATC GCCTTCGAAG ACCGCCGCTT CCGCGACCAT
TGGGGCGTCG ATCCGAGGGG CATCGCGCGG GCGATCTGGG TCAATCTGCG CTCGGGCGGA
CGGACGCAAG GGGCCAGCAC CCTGACCCAG CAACTGGTCA AGAACACCCT GCTCACCCCG
GAAAAGACCT TCACCCGCAA GATCCAGGAG GCCATGCTCG CCCTGTGGAT CGAGCGCAAG
CTGACCAAGG ACGAGATTCT AGAACGCTAC CTCAATTCGC TGTATCTCGG CGCCGGCTCC
TATGGCGTCG ATGCCGCCGC CCGGCGTTAT TTCAACAAGC CGGTGACCGA TCTGTCGCTG
GCGGAATCGG CGATGATCGC CGGATTGATC CAGGCCCCGG CCCGCACCGG CCCGACCACG
GCCCTTGATG TCGCCCGCCA GCGCGCCGAA CTGGTTCTGG ACGTGATGCG CGACCAGGGA
CTGATCGGCG CCGACGAGGC GACCTGGGCC AAGGCCCATC CCGCCTCGCT CGCCGTTCCG
CCGGTCGAAC TGCCGGCCTA TGGCGCGGTG TCGGACTGGA TCGCCGATGA GGCGCGCAAG
GCCCTGGGGC CGCTGTCGGG CGACTTCCTG GTGGTCAGCA CCCTTGATCG CCGGCTGCAG
GTGCTGGCCC AGCAGACGAT CCAGGAGGGA ATGGCCGCCG AGGGCGCAGG CCTGCGCGCC
ACCCAGGCCG CCCTGGTGGC GATGGCCCCC GATGGCCGGG TCCTGGCCAT GGTCGGCGGT
CGCGACTATC AGGAAAGCCA GTTCAATCGC GCCGTCCAGG CCCGCCGCCA GCCCGGTTCG
ATCTTCAAGC TGTTTGTCTA TCTTACGGCG CTGTCGAACA ACTGGCGCCC CGATGACCCG
ATCGACGACA CGCCGCTGAC GATCGACGGC TGGAGCCCCG AGAATTATGG CGGCGGTGCC
GGCCATGGCA GCGTGCCGCT GCGCGTCGCC TTCGCCCATT CCTACAATCT GGCCGCCGTC
CGCCTGCAAG AGGCGGTGGG CCGCGAGGCG GTGATCGCCA CGGCGCGATC GATGGGATTG
AAGGACGATC TCCAACCTTT GCCCAGTCTG GCCCTTGGCA CCTTCCCCGC CACCTTGCTT
GATCTGACCA GCGCCTTCGC CGCCGTCGCC GCCGACCGTG CCACCGTCCA GCCCCGGGTG
ATCGAGGTTC TGCGCACCCC GGGCAGTGGC GAGATCCGCC CGCCGGTGCG CCAGTCGGGC
CGGGCGCCCT GGCCGCGCGC CAGCGCCCTT GATCTGCTCA ACGCCGTTGT CACCCAAGGG
ACCGGACGGG CCGCCGCCCT GGGGGTGCCG ACCTACGGCA AGACCGGCAC CACCCAGGAC
AACCGCGACG CCTGGTTCAT CGGCTTCGCC GGCAATCTGG TGATCGGCGT CTGGGTCGGC
AATGACGACG AAACGCCGAT GACCGGCATC AGCGGCGGCG GCCTGCCGGC CAAGCTGTGG
CAAAGCTTCG CCGCCCGCGC CCTGGCCGGC GGGGTCGCGG GCAGCGCCCC GGCCGCGCCG
ATCGCCGCCG CCACCACCGC CACCCTCCCC GCCGCCGCTC CGCCCGCCCC CACCCCGGCG
CCGGCCGTCC CGTCGCGCCA ACCGTTCTCG GCCGTGCCCG AGGCGGTGGT CGATACCGGA
ACCTTGCGCC TGGGCGGGCG GGTGGTTCGC CTTGAAGGGG TGAAGGGCCT CACCGGCCGT
CCGGCCCGCG ATATGGCGGG CTATATCGGC GATCGCTCCG TCACCTGCCG CCCGGCGGGA
CGCGAGCGCT GGCGCTGCGA TGTCGAAGGC TGGGATCTGT CGGAAGTGGC CTTGTTCAAC
GGCGGCGCCC GCGCCACCGC CGACGCGCCG GCCGATCTGG TCGCCGCCGA ACGCAAGGCC
CGCCAAGCCG GCCGGGGTGT CTGGGGGCGC TGA
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| Protein sequence | MIPSPSDRLS GNRRPEDIDP PEAPRPPRRP ALRHPGRIAL AIAGVVLALG VLVLAINLYT
MPLSPSFQEP ERSGFLIADA EGTVVATRGV TAGRPVALAE MPASLVNAVI AFEDRRFRDH
WGVDPRGIAR AIWVNLRSGG RTQGASTLTQ QLVKNTLLTP EKTFTRKIQE AMLALWIERK
LTKDEILERY LNSLYLGAGS YGVDAAARRY FNKPVTDLSL AESAMIAGLI QAPARTGPTT
ALDVARQRAE LVLDVMRDQG LIGADEATWA KAHPASLAVP PVELPAYGAV SDWIADEARK
ALGPLSGDFL VVSTLDRRLQ VLAQQTIQEG MAAEGAGLRA TQAALVAMAP DGRVLAMVGG
RDYQESQFNR AVQARRQPGS IFKLFVYLTA LSNNWRPDDP IDDTPLTIDG WSPENYGGGA
GHGSVPLRVA FAHSYNLAAV RLQEAVGREA VIATARSMGL KDDLQPLPSL ALGTFPATLL
DLTSAFAAVA ADRATVQPRV IEVLRTPGSG EIRPPVRQSG RAPWPRASAL DLLNAVVTQG
TGRAAALGVP TYGKTGTTQD NRDAWFIGFA GNLVIGVWVG NDDETPMTGI SGGGLPAKLW
QSFAARALAG GVAGSAPAAP IAAATTATLP AAAPPAPTPA PAVPSRQPFS AVPEAVVDTG
TLRLGGRVVR LEGVKGLTGR PARDMAGYIG DRSVTCRPAG RERWRCDVEG WDLSEVALFN
GGARATADAP ADLVAAERKA RQAGRGVWGR
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