| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2511 |
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| Symbol | |
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| ID | 3835945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2918246 |
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| End bp | 2920306 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826619 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_427598 |
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| Protein GI | 83593846 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.315227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCT TTCCGGCATA TCCTTCCCGT CGAAAATGGC GAAGGCGGCT TTTCCTTCTC
GGCGTCATCG GCCTGCTTGC CTGCGTGAAC GGGGCACTCG CCCTGGCCCA AGGCGCTCCT
CCTCCCCAGG ATGAGCCCCT CCACCTGCGA CTGAAATGGA AGCACCAGTT CCAATTCGCC
GGCTATTACG CCGCCCTTGA AAAAGGTTTC TATGCCGGCG AAGGGCTGAG CGTCGTTCTT
GAAGAAGCCT CCGACAGCGA GGACGCGGTA ACGGCGGTGC TCGCCGGCAA GGCCCAGTAT
GGCATCGATT CGACCGAGCT TCTGGTCGCC TATGGCCGGG GCGAGCCGGT TGTCGCCCTG
GCCGCCCTCT TCCAACATTC GCCCGAGGTG CTGCTGGCGC GAACCGACTC GGGAATAACC
TTGCTTCACG ATCTGATCGG CCGGCGGATC TCCCTGCCGC CCGCGTCGCT GTCCCTGCTG
GCCTATCTTG CCGCCGAGGG TATCGGCGCC AACCAGATGA CGATCGTCAG GAACCCGTTT
TCGCCCGATC CCCTGCTCCA GGGCGAGGTC GACGCCATCG GCGCCTATTC CAGCGACGAA
CCGTATTCGC TGCGCCGCCA GGGCATCGAT TTCCTGATGT TCTCGCCGCG TTCGGCCGGC
ATCGATCTCT ACGGGGATAT CTTGTTCACC ACGGCCGCCG AGCTGCGCAG CCATCCCGAC
CGGGTGCGGG CCTTCCGCCG GGCGAGCCTT CGGGGCTGGG AATACGCCCT GGCCCACCCC
CAGGAAATCG CCCGGCTTAT CGCCGATCGC TACCCCGGCC AGCGGACCAT CGATCATCTT
CTGTTCGAGG CGGCGGCCAT GCGCCAGCTT ATCGCCGCCG ATCTGATCGA GCCGGGTTAT
ATGACCCGGG GACGCTGGCA GGCGATCGCC GATCTTTACG CCGGCTTTGG CATGATCGGC
CGCGATCTCG ACCTGGGTCC CTTCCTCTAT GGCCTTGCCG AGACCGACAG AACGCCAAGG
ATCCCCCCGG GCCTGCTTCC GGCCTCGGGC CTTATCGGCG CCTTCGGTCT GGTCGCGGTG
TTCGGCCTGT TGCGCTATCG CAAGATCAAA CGGGCCCTGA CCCGGGAGAT CGGCGAGCGG
CGCATCGTGG AAAGCCACCT GCGCCAAAGC GAAACCCGCT ATCGGATGAT GATCGAGGCC
GCGCCCTTTG GCGTGCTCAT CAGTTCGCTG AGCACCGATC ACATCGTGCA GATCAACGCC
CGGGCCGAGG ATCAGCTACA GGCCATGCGC CACTGGGTGA TCGACAAACC CTTTGCCGAT
CTTTTCGTCG ATCCCGCCGA TCACCGACGC CTGCTTGACA CCTTGAACAA GACCGGAAGC
ATCGCCAATT TCGTCGCCCT GTTGCGCACC GCCACCGACA ATGACTTCTG GGCGGAGCTC
TCCGCCGCGG TGATCGATCT CGACCGCTCG CCCGCCGTCT TCGCCAGCTT CAACGATATT
TCCCAGACCA AGGCGCTTGA ACGGGAATTA CGCGCCCTCG CCGAGCGCGA CTCGCTGACC
GGTCTGGCCA ACCGCCTGCG GGTGATGGAC GCGCTGCGCT CTGAATTCGA CCGCGTCACC
CGCTATGGCG GGGCCTTATC GGTGATGATG CTGGACCTTG ATCGCTTCAA GGTGCTCAAC
GACCGCCATG GTCACGTCTG CGGCGACGAG GCGTTGCGCC ATTTCGCCGC CTCCGCCCTG
GCGACCCTGC GCACCAACGA CCTGCTTGGC CGCTCGGGTG GCGAAGAGTT CATCGTGCTG
TTGCCCGGCG CGGCCTTGGG CGCAGCCAAG CTGATCGGCG AGCGCCTGCG CGCCGCCGTC
CAGGATAAGC CGCTGTCTTG GCAAGGCCGA TCGGTGGCCC TTTCGGTCAG CATCGGCCTT
GCCAGCCGCC AGATCGGCGA TACCCCCGAC AGCCTGCTCG GCCGGGCCGA TCAGGCCCTC
CACCTAGCCA AGGCCAACGG CCGCAACCGC CTGGAAACCG CCGATGGCCC ACCGACGACG
GCGACGGTCA TTCCGCTGTG A
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| Protein sequence | MQAFPAYPSR RKWRRRLFLL GVIGLLACVN GALALAQGAP PPQDEPLHLR LKWKHQFQFA
GYYAALEKGF YAGEGLSVVL EEASDSEDAV TAVLAGKAQY GIDSTELLVA YGRGEPVVAL
AALFQHSPEV LLARTDSGIT LLHDLIGRRI SLPPASLSLL AYLAAEGIGA NQMTIVRNPF
SPDPLLQGEV DAIGAYSSDE PYSLRRQGID FLMFSPRSAG IDLYGDILFT TAAELRSHPD
RVRAFRRASL RGWEYALAHP QEIARLIADR YPGQRTIDHL LFEAAAMRQL IAADLIEPGY
MTRGRWQAIA DLYAGFGMIG RDLDLGPFLY GLAETDRTPR IPPGLLPASG LIGAFGLVAV
FGLLRYRKIK RALTREIGER RIVESHLRQS ETRYRMMIEA APFGVLISSL STDHIVQINA
RAEDQLQAMR HWVIDKPFAD LFVDPADHRR LLDTLNKTGS IANFVALLRT ATDNDFWAEL
SAAVIDLDRS PAVFASFNDI SQTKALEREL RALAERDSLT GLANRLRVMD ALRSEFDRVT
RYGGALSVMM LDLDRFKVLN DRHGHVCGDE ALRHFAASAL ATLRTNDLLG RSGGEEFIVL
LPGAALGAAK LIGERLRAAV QDKPLSWQGR SVALSVSIGL ASRQIGDTPD SLLGRADQAL
HLAKANGRNR LETADGPPTT ATVIPL
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