| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2503 |
|---|
| Symbol | |
|---|
| ID | 3835937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2909246 |
|---|
| End bp | 2910040 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826611 |
|---|
| Product | hydroxypyruvate isomerase |
|---|
| Protein accession | YP_427590 |
|---|
| Protein GI | 83593838 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCT TCGCGGCCAA TCTTTCCACG CTCTTTACCG ACCGCCCGCT CGAGGAGCGG
TTCGCCGCCG CCGCGGCCTG CGGCTTTCGG GGGGTGGAGC TGCAGTTTCC CTATACCTTG
GCCCCGGAAC GGCTGGGCGA TCTGGCGGCG ATGAACCGGC TTGATGTCGT GCTCTTCAAC
GCCCCGCCGG GCGATTGGGC GGCCGGCGAG CGCGGCCTTG CCGCCCTGCC GGGCCGCCAG
AGCGAGTTCC GCGACAGCCT GGAGGTCGTG CTGCCCTATG TGGAACTGGC CGGCTGCGAG
CGCGTCCACG TGATGGCCGG GGTGGTCGCC GAGGACGACT GGCCCGTCGC CCTGGAAACC
TATGTCGAAA ATCTGGCCTA TGCCGCCGAT CTGTTCGCCG AGCGCGGTGT GAAGGTGCTG
ATCGAGGCGG TCAATACCGA GGACATGCCG GGCTATTTCC TGTCGCGTCC CGATGACGCC
TTGCAGGTCA TCGAAGAGGT CGGCCACAAG AACCTGCATG TGCTTTACGA TTTTTATCAC
GCCCAGATCG TTCAGGGCGG GCTGACGGAT TTTCTGGAAT CCAACATCGA GCGCATCGCC
CATGTCCAGG TCGCCGGGGT TCCCGGACGG CGCGAACCCG ATGCCAATGG CGAGATCAAC
TGGCCCTATC TGTTCAATCT GCTCGATGCC CACGGCTTCC CCGGTTGGGT CGGCTGCGAG
TACACCCCGC GCGCCGGCAC CGAGGCCGGC CTGCGCTGGG CGCGGGATTT CGGGATCAGC
GCTCCGGCGG CGTGA
|
|---|
| Protein sequence | MPRFAANLST LFTDRPLEER FAAAAACGFR GVELQFPYTL APERLGDLAA MNRLDVVLFN
APPGDWAAGE RGLAALPGRQ SEFRDSLEVV LPYVELAGCE RVHVMAGVVA EDDWPVALET
YVENLAYAAD LFAERGVKVL IEAVNTEDMP GYFLSRPDDA LQVIEEVGHK NLHVLYDFYH
AQIVQGGLTD FLESNIERIA HVQVAGVPGR REPDANGEIN WPYLFNLLDA HGFPGWVGCE
YTPRAGTEAG LRWARDFGIS APAA
|
|---|
| |