| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2488 |
|---|
| Symbol | |
|---|
| ID | 3835922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2892239 |
|---|
| End bp | 2894053 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637826596 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_427575 |
|---|
| Protein GI | 83593823 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCGT GCGGGACCGC TTCCACGTCC CCGGAAAAAT CCGCCGCGAT CCTGGCCGGG
CCGCCGTCGC CCGGGGTCGA GGGGACGCGG TCCGATTTGG CGCGCGCCCG CGTCGTCGCC
CGGGCCTGGG CTGAAACCCT GACGCCGGCG CGGCGCGCCG ATCAGGCCTT GCTGTTCACC
ACCGCCGCGA TGGCGGCCCT GCGCAAGGGG ATCGGCGTCG AGGCTGTTGC CCGCCCCGGT
TTCGCCCGAC CGCGCGGCCG CCTCGATCAC GCCGGCGCCC GGGTGGCCCA GGCGATCGGC
GAGGACGCCG CCCTGCTGCC TTTGGCCGAG GCGCTGCATC TGATCACCGG CCTCTATCCG
GCGCTGTTGC CCGCCCGCGA GCGCGGCGCC CTGGGCGCCT TTTACACGCC GATCGCCCTG
GTCGAGCGCC TGCTTGATCG CGCGACCGAG GAGGGCGCCG ATTGGGCCGG GCTGCGTTTG
CTTGATCCGG CCGCCGGTGG CGGGGCCTTT CTGCTGGGCG CCGTCGCCCG CATCCGCGCC
GCCTTGGCCG GCTGCGAACC GGCCTTCATC CTGGGGCGGA TCGGCGCCCG GGTGCTGGGG
CTCGAGGTCG ATGCGAGGGC GGCCGCCCTG GCCCAGGCCG CGCTCGATAT TCTTCTGGCC
GATCTGGCCC AAGCCGCCGG ACGGCCGCCG CCGGTGGTGT TGCGGGTGGC CGATACCCTG
GAAATCCCCG CCGATCCCAG CTTCGATCTG GTGGTCGGCA ATCCGCCCTA TGGACGGGTC
GGCCTGACCC CGGCCCAGCG CGCCCGCTTT GGTCGCGGGC TGTATGGCCA TGCCAATCTG
TATGGGGTGT TCACCGATAT CGCCCTGCGC TGGACGGCGC CGGGCGGGCT GATCGCCTAT
CTCACCCCCA CCAGTTTTCT GGCCGGGCGC TACTATGGCG CCTTGCGCGG ACTGCTGGCG
GCGGAAGCGC CGCCGCTGTC GATCGATTTC GTCCATGCCC GCCAGGGGGT GTTCGAGGAT
GTTTTGCAAG AAACCCTGCT GGCGCTTTAT CGCCGTGGCG GGCAAGCCGG GCGGGTGCGC
ATTCATTATC TGACCCTGGA CGGCGAGGGG CGGGCGCGGA TCGCCCATAA TGGCACCATT
GGCCTGCCCG CCGATGCCGG CGCCCCCTGG CTGGCGCCGC GCGATCCCGG CCAGGGGCAC
CTAGTCGCCC GGGTCGAGGC CATGGGCCAT CGACTGGCCG AGTGGGGCTA TGGGGTGTCG
ACCGGGCCTT TGGTGTGGAA CCGCTATAAG GGCCAGCTCC GCGACCGGCC GACGGGCAAG
CGGGTTCATC CGCTGATCTG GGCCGAGGCG GTCACGGCGG ACGGCCGCTT TGTTTTCCGC
GCCGCCAAAC GCAACCATGC GCCCTATTTC AAGCTGCAGG CCGGCGATGA CGCGCTTCTG
GTCGGCGAGC CCTGCGTGCT GGTCCAGCGC ACCACCGCCA AGGAACAGCA CCGCCGGCTG
ATCGCCGCCG AACTGCCCGC GGCTTTTGTC GCCGGCCATG GCGGGGTGGT GGTGGAGAAC
CATCTGAACA TGGTGCGCGC CAAGGGCACC CCCCGGGTGG CGCCGGCGGT GGTGGCGGCC
CTGCTCAACA GCGCCGTTGT CGATCAGGTG TTTCGCTGCA TGAGCGGTAG CGTCGCCGTA
TCGGCCTTTG AACTGGAAGC CCTGCCGCTG CCCGCCGCCG GCGATCTGGG GCCGCTGACG
GCCCTGGTGG CCGCCGGCGC CCCGCGCGAT GACATCGAAG CCGAATGCGC CCGGCTCTAT
GGGAAGGGGC TTTGA
|
|---|
| Protein sequence | MTPCGTASTS PEKSAAILAG PPSPGVEGTR SDLARARVVA RAWAETLTPA RRADQALLFT
TAAMAALRKG IGVEAVARPG FARPRGRLDH AGARVAQAIG EDAALLPLAE ALHLITGLYP
ALLPARERGA LGAFYTPIAL VERLLDRATE EGADWAGLRL LDPAAGGGAF LLGAVARIRA
ALAGCEPAFI LGRIGARVLG LEVDARAAAL AQAALDILLA DLAQAAGRPP PVVLRVADTL
EIPADPSFDL VVGNPPYGRV GLTPAQRARF GRGLYGHANL YGVFTDIALR WTAPGGLIAY
LTPTSFLAGR YYGALRGLLA AEAPPLSIDF VHARQGVFED VLQETLLALY RRGGQAGRVR
IHYLTLDGEG RARIAHNGTI GLPADAGAPW LAPRDPGQGH LVARVEAMGH RLAEWGYGVS
TGPLVWNRYK GQLRDRPTGK RVHPLIWAEA VTADGRFVFR AAKRNHAPYF KLQAGDDALL
VGEPCVLVQR TTAKEQHRRL IAAELPAAFV AGHGGVVVEN HLNMVRAKGT PRVAPAVVAA
LLNSAVVDQV FRCMSGSVAV SAFELEALPL PAAGDLGPLT ALVAAGAPRD DIEAECARLY
GKGL
|
|---|
| |