Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2485 |
Symbol | |
ID | 3835919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2888640 |
End bp | 2890022 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637826593 |
Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_427572 |
Protein GI | 83593820 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.120938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTCGTC TTATCGTTGT CTCCAACCGC GTGGCGCTTC CCGAGGATCA AGCCGGCCGC GCGGGGGGAT TGGCCGTGGC TTTGCGCGAA GCGCTGGTCT CGTTTGGCGG GATCTGGTTT GGCTGGAGCG GCAAGGTCGC CGCCCAGACA TCGGACCGGC CGCGCTTCAT CGAGGAAGGC CCGGTCACCT ATGCGGTGCT CGATCTTGGC CGCAAGGATC ACGCCCAGTA TTACAACGGT TTCGCCAATC GCACCCTGTG GCCGCTTTTT CATTATCGCA TGGGGTTGGC CGAATTCACC CGCCAGGACT ACGAAGGCTA TATGCGGGTC AATACGGTTT TCGCCGAGCA GCTTCAACCG CTGCTGACCG ATGATGATCT GATCTGGGTC CATGATTATC ACCTGATCCC GCTGGGGGGA GAACTGCGCC GCCTGGGGGC GCGCCAGCGC ATGGGCATCT TCCTGCACAC GCCCTTTCCG GCGATGGAGG TATTGCTGGC CCTGACCCAC CATCGCCGAC TGGTCGGTTC GCTGTGCGCC TATGATGTCG TCGGCTTCCA GACCGAAAAC GACCGGCGCT CGTTCTTCGA TTACGTCCTG CATGAAGCCG GCGGCTGGAT TGGCGAGAAC GGCCATGTCA CCGTCTGGGG GCGCTCGCTG GTCGCCCGGG TTTATCCCAT CGGCATCGAG AAAGGCGCCT TCGCCGAGGC CGCCCAGCGC GCCCAGCGCA CGGTCGCCTA TCGCCGGCTG CGCGCCAGCC TGAACGGCCG CAAGCTGATG ATCGGGGTCG AGCGCCTGGA TTATTCCAAG GGCCTGCCCG AACGCTTCGA GGCTTTTTCG CGCCTGCTCG AAAAGCATCC CGAGCATCGC GCCAAGGTCA GTTTCATGCA GGTCGCGCCA ATTTCCCGCT CCGAGGTTCC CGAATACCGG CGCCTGCGCG AGGAACTCGA AAGCCTGTCG GGCCAGATCA ATGGCCAGTT CGGCGATTAC GATTGGGTGC CAATCCGCTA CCTCACCCGC AACTTCGCCA GATCGGTCCT GGCCGGTTTC TACCGACAAG GGGCCGTCGG CGTTGTCACG CCAATGCGCG ATGGTATGAA TCTTGTGGCA AAAGAATACG TTGCCAGCCA GAATCCCCAG GACCCCGGGG TGCTGGTTCT TTCGCGCTTC GCCGGGGCGG CCCGCGAACT GACAACGGCG CTTCAGGTCA ACCCCTTCGA CCGCGAGGAT ATGGCCGATG CCATGGACAG GGCCTTGGGC ATGGCTTTGG ACGAGCGCAA GGAGCGTTGG GTTGAAATGA TGCGTATGGT CGATGAAAAC TCGCTGGAAG CTTGGCGCGA GAAGTATCTG GCCGATCTGA ACGCGGCGCC GTTCAATGGC TGA
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Protein sequence | MARLIVVSNR VALPEDQAGR AGGLAVALRE ALVSFGGIWF GWSGKVAAQT SDRPRFIEEG PVTYAVLDLG RKDHAQYYNG FANRTLWPLF HYRMGLAEFT RQDYEGYMRV NTVFAEQLQP LLTDDDLIWV HDYHLIPLGG ELRRLGARQR MGIFLHTPFP AMEVLLALTH HRRLVGSLCA YDVVGFQTEN DRRSFFDYVL HEAGGWIGEN GHVTVWGRSL VARVYPIGIE KGAFAEAAQR AQRTVAYRRL RASLNGRKLM IGVERLDYSK GLPERFEAFS RLLEKHPEHR AKVSFMQVAP ISRSEVPEYR RLREELESLS GQINGQFGDY DWVPIRYLTR NFARSVLAGF YRQGAVGVVT PMRDGMNLVA KEYVASQNPQ DPGVLVLSRF AGAARELTTA LQVNPFDRED MADAMDRALG MALDERKERW VEMMRMVDEN SLEAWREKYL ADLNAAPFNG
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