Gene Rru_A2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2485 
Symbol 
ID3835919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2888640 
End bp2890022 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content62% 
IMG OID637826593 
ProductAlpha,alpha-trehalose-phosphate synthase (UDP-forming) 
Protein accessionYP_427572 
Protein GI83593820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0380] Trehalose-6-phosphate synthase 
TIGRFAM ID[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCGTC TTATCGTTGT CTCCAACCGC GTGGCGCTTC CCGAGGATCA AGCCGGCCGC 
GCGGGGGGAT TGGCCGTGGC TTTGCGCGAA GCGCTGGTCT CGTTTGGCGG GATCTGGTTT
GGCTGGAGCG GCAAGGTCGC CGCCCAGACA TCGGACCGGC CGCGCTTCAT CGAGGAAGGC
CCGGTCACCT ATGCGGTGCT CGATCTTGGC CGCAAGGATC ACGCCCAGTA TTACAACGGT
TTCGCCAATC GCACCCTGTG GCCGCTTTTT CATTATCGCA TGGGGTTGGC CGAATTCACC
CGCCAGGACT ACGAAGGCTA TATGCGGGTC AATACGGTTT TCGCCGAGCA GCTTCAACCG
CTGCTGACCG ATGATGATCT GATCTGGGTC CATGATTATC ACCTGATCCC GCTGGGGGGA
GAACTGCGCC GCCTGGGGGC GCGCCAGCGC ATGGGCATCT TCCTGCACAC GCCCTTTCCG
GCGATGGAGG TATTGCTGGC CCTGACCCAC CATCGCCGAC TGGTCGGTTC GCTGTGCGCC
TATGATGTCG TCGGCTTCCA GACCGAAAAC GACCGGCGCT CGTTCTTCGA TTACGTCCTG
CATGAAGCCG GCGGCTGGAT TGGCGAGAAC GGCCATGTCA CCGTCTGGGG GCGCTCGCTG
GTCGCCCGGG TTTATCCCAT CGGCATCGAG AAAGGCGCCT TCGCCGAGGC CGCCCAGCGC
GCCCAGCGCA CGGTCGCCTA TCGCCGGCTG CGCGCCAGCC TGAACGGCCG CAAGCTGATG
ATCGGGGTCG AGCGCCTGGA TTATTCCAAG GGCCTGCCCG AACGCTTCGA GGCTTTTTCG
CGCCTGCTCG AAAAGCATCC CGAGCATCGC GCCAAGGTCA GTTTCATGCA GGTCGCGCCA
ATTTCCCGCT CCGAGGTTCC CGAATACCGG CGCCTGCGCG AGGAACTCGA AAGCCTGTCG
GGCCAGATCA ATGGCCAGTT CGGCGATTAC GATTGGGTGC CAATCCGCTA CCTCACCCGC
AACTTCGCCA GATCGGTCCT GGCCGGTTTC TACCGACAAG GGGCCGTCGG CGTTGTCACG
CCAATGCGCG ATGGTATGAA TCTTGTGGCA AAAGAATACG TTGCCAGCCA GAATCCCCAG
GACCCCGGGG TGCTGGTTCT TTCGCGCTTC GCCGGGGCGG CCCGCGAACT GACAACGGCG
CTTCAGGTCA ACCCCTTCGA CCGCGAGGAT ATGGCCGATG CCATGGACAG GGCCTTGGGC
ATGGCTTTGG ACGAGCGCAA GGAGCGTTGG GTTGAAATGA TGCGTATGGT CGATGAAAAC
TCGCTGGAAG CTTGGCGCGA GAAGTATCTG GCCGATCTGA ACGCGGCGCC GTTCAATGGC
TGA
 
Protein sequence
MARLIVVSNR VALPEDQAGR AGGLAVALRE ALVSFGGIWF GWSGKVAAQT SDRPRFIEEG 
PVTYAVLDLG RKDHAQYYNG FANRTLWPLF HYRMGLAEFT RQDYEGYMRV NTVFAEQLQP
LLTDDDLIWV HDYHLIPLGG ELRRLGARQR MGIFLHTPFP AMEVLLALTH HRRLVGSLCA
YDVVGFQTEN DRRSFFDYVL HEAGGWIGEN GHVTVWGRSL VARVYPIGIE KGAFAEAAQR
AQRTVAYRRL RASLNGRKLM IGVERLDYSK GLPERFEAFS RLLEKHPEHR AKVSFMQVAP
ISRSEVPEYR RLREELESLS GQINGQFGDY DWVPIRYLTR NFARSVLAGF YRQGAVGVVT
PMRDGMNLVA KEYVASQNPQ DPGVLVLSRF AGAARELTTA LQVNPFDRED MADAMDRALG
MALDERKERW VEMMRMVDEN SLEAWREKYL ADLNAAPFNG