Gene Rru_A2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2476 
Symbol 
ID3835910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2876437 
End bp2877510 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID637826584 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_427563 
Protein GI83593811 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACC CCGCGAGCGA CCCCTGGGGC GCGGCCCCGC CCTCCCCCGC CGAAACGCCG 
GCCGGCGATT GGCTGGGGGG CGCCTCCGCT CCGCCGCCGG CCTTCGATTG GGCCGACCCC
TTCGCCCGGC CGCTGATTCC GCTCGACGAC TGGACCAATC AGGGGCTCGA CTGGCTGGTC
TTGTCCTTCC GCCCGCTCTT CCAGGCGATC CGCTGGCCCA TCGACGCCGT GCTGACGGCG
CTCAACGGCA CGCTCGTCGG TGTGCCGCCC CCCGTCATGC TGGCGATCAT CGCCCTCCTC
GCTTGGCAAA TCGCCGGGCG CAAGATGGCG ATCGGCTCTT TGATCTCGAT GACTCTCATC
GGTCTGATCG GCGCCTGGAG CGAAGCGATG CTGACCTTGT CGCTGGTCTT GACCTCGGTG
ATGTTCTGCA TCGCCCTCGG CCTGCCCTCG GGCATCCTGA TGGCGCGCAG CGACCGGCTG
GCCAAACTCT CGCGGCCTTT GCTCGATGCC ATGCAGACGA CCCCGGCCTT CGTCTATCTG
GTGCCCATCG TCATGCTGTT TGGCATCGGC AATGTGCCCG GGGTGGTGGT GACGATCATC
TTCGCCCTGC CGCCCTTGAT CCGCCTGACC AATCTGGGGA TTAGGCAGGT TCCCGAAGAT
CTGGTCGAAG CCGCGCGCAG TTTCGGCGCC TCGAAAACCC AGTTGCTGAC CAAGGTGCAA
CTGCCGCTGG CCCTGCCGAC GATCATGGCG GGCATCAACC AAACGCTGAT GCTGGCGCTG
TCGATGGTGG TGATCGCCTC GATGATCGCC GTTGGCGGGC TGGGGCAAAT GGTTCTGCGC
GGCATCGGCC GGCTTGATAT GGGGCTGGCC ACCGTTGGCG GCGTCGCCAT CGTCTTGCTG
GCCATTCTGA TCGATCGCCT GACCCAGTCG ATGGGCGTCG CCAGCGCCGC CCAGGCCAAG
GCACCCTGGT ACACCAGCGG TCCCGTCGGA CTGGTCGTGC GTCTGGTGTC CCTGCGCAAG
GGCACCGCCC ACCCCGCTCG CGAAAGCCTG CCAAAAGGAG AACCGATCTC ATGA
 
Protein sequence
MADPASDPWG AAPPSPAETP AGDWLGGASA PPPAFDWADP FARPLIPLDD WTNQGLDWLV 
LSFRPLFQAI RWPIDAVLTA LNGTLVGVPP PVMLAIIALL AWQIAGRKMA IGSLISMTLI
GLIGAWSEAM LTLSLVLTSV MFCIALGLPS GILMARSDRL AKLSRPLLDA MQTTPAFVYL
VPIVMLFGIG NVPGVVVTII FALPPLIRLT NLGIRQVPED LVEAARSFGA SKTQLLTKVQ
LPLALPTIMA GINQTLMLAL SMVVIASMIA VGGLGQMVLR GIGRLDMGLA TVGGVAIVLL
AILIDRLTQS MGVASAAQAK APWYTSGPVG LVVRLVSLRK GTAHPARESL PKGEPIS