Gene Rru_A2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2413 
Symbol 
ID3835847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2814198 
End bp2815994 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content62% 
IMG OID637826521 
ProductPoly(R)-hydroxyalkanoic acid synthase, class I 
Protein accessionYP_427500 
Protein GI83593748 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00967044 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATC AGGGCAGCGA GAAGACCCCT CCCGATCCGG CGCGGATCGG CAAGACCATG 
GCCGATATCG CAGAACGCAG CCAGAAACTC GTCACCGATT TCATGACCCG CCAGGCGACC
AGTCCGACCG GGGGAATGGA TGATCCGATG AATATCGGGC AGGCCTTCCT TGATATGACC
CGGCAGATGA TGTCCCACCC CGAACGCCTG GTCGAAGCCC AGATGAGCCT GTGGCAAGAC
TACCTCGCGT TGTGGCAGAC CACGGCTTTG CGGATGATGG GCGCCGAGGC CCATCCGGTG
GCCACCCCGG CCCAGGGCGA TCGGCGGTTC AAGGACGAGG CCTGGGACAA CAACGAGGTC
TTCGATTTCA TCAAGCAAAC CTACCTGCTG ACGGCGCGCT GGATGCAGGG CGTCGTCCGT
GATGTCGACG GCATGGATCG CCATACCGCC GAGAAGGTCG ATTTCTATAC GCGGCAGTTC
GTCGATGCCA TGGCGCCGTC GAATTTCGCC CTAACCAACC CGGAAGTGAT CCGCGAAACC
CTTGATAGCG GCGGCGAAAA TCTGGTGAAG GGCCTAGAGC ACCTGCTCCA CGACCTGGAG
CGCGGCAAGG GCCAGTTGCG CATTTCGATG ACCGATGAAA GCGCCTTCGA GGTTGGGGTG
AACGTGGCGG CGACCCCGGG CAAGGTCATC GCCCGCAACA GCCTGATGGA GCTTCTTCAA
TACACCCCGA CCACCGAACA GGTCCACAAG CGGCCCCTGC TGATCATTCC GCCCTGGATC
AACAAGTACT ACATCCTGGA TCTACGCCCC AAGAACAGCT TCATCAAATG GGCGATCGAT
CAGGGTCATA GCGTCTTCGT CATTTCGTGG GTCAACCCCG AGGCCGATCT CGCCGCCAAG
TCCTTCGAAG ACTATATGGT GGAAGGCCCC TTGGCCGCGC TTGATATCAT CAAGACGATC
ACCGGCGAGG ACTCGGTCAA CGCCATCGGC TATTGCCTGG GCGGCACACT GCTGGGATGC
GTTCTGTCCT ATCTGGAAGC CAAGGGCCAG TCCGACCGCA TCGCCTCGGC CACCCATTTC
ACCGCCATGC TCGATTTCAG CGAGCCCGGC GAACTGGGGA TCTTCATCGA CGACCAGAGC
CTGACCTTCC TTGAGGGCAA GATGAACAAG GTCGGCTATC TCGATGGCAG CGAGATGGCC
ACCACCTTCA ACATGCTGCG CGCCAATGAT CTGATCTGGT CCTTCGTCGT CAATAACTAC
CTGATGGGCA AGGATCCCTT CCCCTTCGAT CTTTTGTACT GGAACGCCGA CAGCACCCGC
ATGCCCGCGG CCATGCACAG CTTCTATCTG CGCAAGATGT ACCAGGAAAA CGTGCTGAAG
GACCCCGGCG GCGTGACGCT GCTTGGCGTG CCCATCGACC TGCGGCGCAA CCGCACGCCC
AGCTATTTCG TCAGCGCCCG CGAAGACCAT ATCGCCCCCT GGCGCTCGAC CTTCGCCGGA
GCCCAGCTTT ACAGCGGCCC GGTGCGCTTC GTTCTCGCCG CCTCGGGCCA TATCGCCGGG
GTGGTCAATC CGCCCTCGGC CAATAAATAC TGCTTCTGGA CCAATACCAA GAAGGCCAAG
GATGCCGAAT CCTGGCTGGA AAAGGCCAGC CAGACCGACG GCTCGTGGTG GACCGATTGG
GAGGCCTGGG TCGAGAAGTT CACCGAGGGC AAGGTTCCCG CCCGGGTTCC CGGCGACGCC
GGCGTGCCGG TGCTGGGCGA CGCCCCGGGC GATTACGTGA AGGTGCGCGC CGGCTAG
 
Protein sequence
MANQGSEKTP PDPARIGKTM ADIAERSQKL VTDFMTRQAT SPTGGMDDPM NIGQAFLDMT 
RQMMSHPERL VEAQMSLWQD YLALWQTTAL RMMGAEAHPV ATPAQGDRRF KDEAWDNNEV
FDFIKQTYLL TARWMQGVVR DVDGMDRHTA EKVDFYTRQF VDAMAPSNFA LTNPEVIRET
LDSGGENLVK GLEHLLHDLE RGKGQLRISM TDESAFEVGV NVAATPGKVI ARNSLMELLQ
YTPTTEQVHK RPLLIIPPWI NKYYILDLRP KNSFIKWAID QGHSVFVISW VNPEADLAAK
SFEDYMVEGP LAALDIIKTI TGEDSVNAIG YCLGGTLLGC VLSYLEAKGQ SDRIASATHF
TAMLDFSEPG ELGIFIDDQS LTFLEGKMNK VGYLDGSEMA TTFNMLRAND LIWSFVVNNY
LMGKDPFPFD LLYWNADSTR MPAAMHSFYL RKMYQENVLK DPGGVTLLGV PIDLRRNRTP
SYFVSAREDH IAPWRSTFAG AQLYSGPVRF VLAASGHIAG VVNPPSANKY CFWTNTKKAK
DAESWLEKAS QTDGSWWTDW EAWVEKFTEG KVPARVPGDA GVPVLGDAPG DYVKVRAG