Gene Rru_A2405 details

Gene Information

• Locus tag: Rru_A2405
• ID: 3835839
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 2799977
• End bp: 2802025
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637826513
• Product: transketolase
• Protein accession: YP_427492
• Protein GI: 83593740
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTCA CCACCGCCGC CCCGCCGCCC CGCGCCGACC ACGGTGATCC CCAGATCGCC 
GAACGGGCGG CCACCGCCAT TCGCATGCTT GCCGCCGATG CCGTGGAAAA GGCCAAATCC 
GGCCATCCCG GCGCGCCGCT GGGCATGGCC GATATCGCGG TGGCGCTATG GGGCGTCAAC 
GGTGGCGGCG TGGTCCATCA CAATCCGGCC AATCCCTCCT GGCCCGACCG CGACCGGGTG 
GTGCTGTCGA ACGGCCATGC CTCGATGCTG CTCTACGCCC TGCTCCATCT GACCGGCTAT 
GACCTGAGCG CCGCCGATCT GGCCGCCTTC CGCCAGTTCG GCAGCCGCAC CCCGGGCCAT 
CCCGAGGTCG ACCAGACCCC GGGGGTTGAA ACCACCACCG GGCCGCTCGG CCAGGGGCTG 
GCCAATGGCG TCGGCTTCGC CTTGGCCGAG AAGATTTTGG CCGAGACCTT CAATCGTCCC 
GACCATGCCA TCGTCGACCA TCACACCTGG GTGCTGCTTG GCGATGGCTG CCTGATGGAA 
GGGATCAGCC ACGAGGTCGC GTCCCTGGCC GGTCGCCTGG GCCTGGGCAA GCTGATCTGC 
CTTTATGACG ACAACGGCAT CTCGATCGAT GGCGCGGTCG AGGGCTGGTT CAGCGACGAT 
ACTCCGGCGC GCTTCCGCGC CTATGGCTGG CAGGTGATCG AAGGCGTCGA CGGCCACGAG 
ATCTCGGCCG TGTCCCTCGC CCTGACCGAG GCCAAGGCCG ACGCCCTGCG CCCCACCCTG 
ATCTGCTGCC GCACGGTGAT CGGCCAGGGC GCGCCGACCA AGGCCGGCGG CCACGATGTC 
CACGGCGCGC CGCTGGGCGC GGCCGAAATC GCCGCCATGC GCGAAAGCCT GAACTGGCCC 
TATGCGCCCT TCGAGGTGCC CGAGGATATC CGCGCCGCCT GTGACGCCCG CCCGGCCGGC 
GCGGCGCTGG AAGCGGCATG GCGCGCACGC TTCGCGGCTT ACCAAAGCGC CTATCCCGAG 
CTTGCCGCCG AGTTCGAGCG GCGGCTGGCG AGCACCTTCC CCGCCGATTT CGCCCAGACC 
GAAGAGGCGC TGTTTGCCGA TCTGATCGCC GCGGGAACCG TCGCCAGCCG CAAGGCCAGC 
CAGCTCGCCA TCCGCCGGCT GGCCCCGGCC CTGCCCGAGC TGCTGGGCGC CTCGGCCGAT 
CTCACCGGGT CGAACCTCAC CGACTGGCCG GGGGCGGCGC GCATCAACGA CGGTCCGGCC 
GGGCGCTATC TGTCGGCGGG CGTGCGCGAG TTCGGCATGG CCGCCGTTCT CAACGGCATG 
GCCTTGCATG GCGGCTTCAT TCCCTTTGGC GGCACCTTCC TGGTGTTTTC CGATTATTCG 
CGCAACGCCA TTCGTCTGGC CGCCCTGATG CGCCGGAGGG TCATCCATAT TCTCACCCAT 
GATTCCATCG GCCTGGGCGA GGATGGGCCG ACCCATCAGC CGGTCGAACA CGCCGCCTCG 
CTGCGCCTGA TCCCCAATCT GGCCGTCTGG CGCCCCGGCG ACGCCTTTGA AACCGCTGTC 
GCCTGGAGCG CCGCGCTTCG CCGCGCCGAT GGCCCCTCGG CCCTGTTGCT CTCGCGCCAG 
AACCTGCCGG CCCAAAGCTT TGACGGCGAC CGCCGGGCGG CGGCGTCGCG CGGCGGCTAT 
ACGCTGTCGG CCCGTCCCCA GCCGCGCGCC ATCATCCTGG CCAGCGGCTC CGAGCTGGGC 
CTCGCCACCG CCGCCCAGGC GCTGCTCGAT GGCGAAGGGA TCGCGGTGAA CGTGGTGTCG 
GTTCCCTGTC TCGAGCTGTT TTTGTCCCAG CCCAAGGACT GGATCGACGC GGTTCTGCCG 
CCCGACCTGC CCCGTCTGGC CGTCGAAGCC GCCCATCCCG ATCCCTGGTG GAAGGTGGTC 
GGCCTTGAAG GCGCGGTCAT CGGCATGGAC CGCTTCGGCG AATCCGCCCC GGCGCCCGAG 
TTGTTCGCCC ATTTCGGCTT CACCCCGGCG GCGGTCGCCG CCCGGCTGCG CGACTTGCTC 
GCGAAATAG 

 

Protein sequence

MTVTTAAPPP RADHGDPQIA ERAATAIRML AADAVEKAKS GHPGAPLGMA DIAVALWGVN 
GGGVVHHNPA NPSWPDRDRV VLSNGHASML LYALLHLTGY DLSAADLAAF RQFGSRTPGH 
PEVDQTPGVE TTTGPLGQGL ANGVGFALAE KILAETFNRP DHAIVDHHTW VLLGDGCLME 
GISHEVASLA GRLGLGKLIC LYDDNGISID GAVEGWFSDD TPARFRAYGW QVIEGVDGHE 
ISAVSLALTE AKADALRPTL ICCRTVIGQG APTKAGGHDV HGAPLGAAEI AAMRESLNWP 
YAPFEVPEDI RAACDARPAG AALEAAWRAR FAAYQSAYPE LAAEFERRLA STFPADFAQT 
EEALFADLIA AGTVASRKAS QLAIRRLAPA LPELLGASAD LTGSNLTDWP GAARINDGPA 
GRYLSAGVRE FGMAAVLNGM ALHGGFIPFG GTFLVFSDYS RNAIRLAALM RRRVIHILTH 
DSIGLGEDGP THQPVEHAAS LRLIPNLAVW RPGDAFETAV AWSAALRRAD GPSALLLSRQ 
NLPAQSFDGD RRAAASRGGY TLSARPQPRA IILASGSELG LATAAQALLD GEGIAVNVVS 
VPCLELFLSQ PKDWIDAVLP PDLPRLAVEA AHPDPWWKVV GLEGAVIGMD RFGESAPAPE 
LFAHFGFTPA AVAARLRDLL AK