Gene Rru_A2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2401 
Symbol 
ID3835835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2796032 
End bp2796979 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID637826509 
ProductLysR family transcriptional regulator 
Protein accessionYP_427488 
Protein GI83593736 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.38508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCACG CCACCTTGCG GCAGATGCAG ATTTTCGACG CCGTCGCCCG CCACCTCAGC 
TTCTCCAACG CCGCCCGGGA ACTGGGGCTG ACCCAGCCGG CGGTGTCGTT GCAAATCAAG
CAGATCGAGG CCCTGGCCGG CTTGCCGCTG TTTGAGCAGA TGGGTCGGGT GCTGCTGCTC
ACCCAGGCCG GAACCATTCT TCTCGGGCAT GTGCGGACCA TTCTGGCGGC GGTGACCGAT
GCCGACAAGG CGATGGACGC CCTGAAGGGC AAGCGCGCCG GGGCGTTGCG CATCGGCGTG
GTCAGCACCG CCAAATACTT CGCCCCCCGC CTGCTCTCGG TGTTCACCGC CGGCTATCCC
GGTGTTGAAC TGGGGCTGAC GGTGGCCAAT CGCGAGCAGA TCCTGGGGAT GATCCAGGAA
AACGCCCTGG ACCTGTTCAT CATGGGCCGG CCGCCGACCG AGCCGGCGGT GCGCGCCGAA
CGCTTCGCCC CCAATCCGAT GGTGATGGTC GCGGCGTCGG ATCATCCGCT GGTGCGGCGC
AAGCTGACGT TCCACGATCT GTCGGGGGAA ACCTTTCTGA TGCGCGAGCC GGGGTCGGGC
ACGCGCATCC TTATGGAAAA GCTGATGACC GACCATGGGG TGCTGCCCCA CCGCATGATC
GAGATGTCGA GCAATGAGAC CATCAAGCAG GCGGTGATGG CCGGCATGGG CATCAGCCTG
CTGTCGCGCA ACACCATGAG CCTGGAGCTT TCGGTCGGCC GGCTGGTGAT CCTTGATGTG
GAAGGGCTGC CGATCCAGCG CGACTGGTAT GTGGTGATCC GCGAGGGCAA GCACCTGCTG
CCGGTGGCCG AGGCGATGGT GGCCTTTCTC AAGGCGCGCG GCGAGGACCT GTTGAGCGAC
GCCATCCGCA CCCTGCCGCC GCGCCGCAAC CGTCATGTCA GCGGCTGA
 
Protein sequence
MRHATLRQMQ IFDAVARHLS FSNAARELGL TQPAVSLQIK QIEALAGLPL FEQMGRVLLL 
TQAGTILLGH VRTILAAVTD ADKAMDALKG KRAGALRIGV VSTAKYFAPR LLSVFTAGYP
GVELGLTVAN REQILGMIQE NALDLFIMGR PPTEPAVRAE RFAPNPMVMV AASDHPLVRR
KLTFHDLSGE TFLMREPGSG TRILMEKLMT DHGVLPHRMI EMSSNETIKQ AVMAGMGISL
LSRNTMSLEL SVGRLVILDV EGLPIQRDWY VVIREGKHLL PVAEAMVAFL KARGEDLLSD
AIRTLPPRRN RHVSG