Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2400 |
Symbol | |
ID | 3835834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2794507 |
End bp | 2795907 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637826508 |
Product | ribulose bisphosphate carboxylase |
Protein accession | YP_427487 |
Protein GI | 83593735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.9177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCAGT CATCTCGTTA CGTCAATCTG GCGCTCAAGG AAGAGGATCT GATCGCCGGC GGCGAGCATG TGCTTTGTGC CTATATCATG AAGCCCAAGG CCGGATATGG CTATGTGGCG ACCGCGGCGC ATTTCGCCGC CGAGAGTTCG ACGGGCACCA ACGTCGAGGT CTGCACCACC GACGATTTCA CCCGGGGCGT CGACGCCCTG GTCTATGAGG TGGACGAGGC CCGCGAGCTG ACCAAGATCG CCTATCCGGT GGCTTTGTTC GACCGCAACA TCACCGACGG CAAGGCGATG ATCGCCTCGT TCCTGACGCT CACCATGGGA AACAACCAGG GTATGGGCGA CGTGGAATAC GCCAAGATGC ACGATTTCTA TGTGCCCGAG GCTTATCGCG CCCTGTTTGA TGGCCCGAGC GTCAATATCT CGGCCCTGTG GAAAGTGCTG GGGCGGCCCG AGGTCGACGG CGGTCTGGTC GTCGGCACGA TCATCAAGCC GAAGCTCGGC CTGCGTCCCA AGCCCTTCGC CGAGGCCTGC CACGCCTTCT GGCTGGGCGG CGACTTCATC AAGAACGACG AGCCCCAGGG CAATCAGCCC TTCGCCCCCT TGCGCGACAC CATCGCCCTG GTCGCCGACG CCATGAGGCG GGCCCAGGAC GAGACCGGCG AGGCCAAGCT GTTCTCGGCC AATATCACCG CCGACGATCC CTTCGAGATC ATCGCCCGTG GCGAGTATGT GCTGGAGACC TTCGGCGAGA ACGCCTCGCA TGTCGCCTTG CTGGTCGACG GCTATGTCGC CGGCGCCGCG GCGATCACCA CGGCGCGCCG CCGCTTCCCC GATAACTTCT TGCATTATCA CCGGGCTGGC CACGGCGCCG TCACCTCGCC CCAGTCCAAG CGCGGCTATA CCGCCTTCGT CCATTGCAAG ATGGCCCGCC TGCAGGGCGC CAGCGGCATC CACACCGGCA CCATGGGCTT TGGCAAGATG GAAGGCGAGT CCAGCGACCG CGCCATCGCC TATATGCTGA CCCAGGACGA GGCCCAGGGG CCGTTCTACC GTCAATCCTG GGGCGGCATG AAGGCTTGTA CGCCGATCAT CAGCGGCGGC ATGAACGCCC TGCGCATGCC CGGCTTCTTC GAGAACCTGG GTAATGCCAA TGTCATCTTG ACCGCCGGCG GCGGCGCCTT CGGCCATATC GACGGCCCGG TGGCCGGGGC GCGGTCGTTG CGTCAAGCCT GGCAAGCCTG GCGGGACGGG GTTCCGGTTC TGGACTATGC CCGCGAGCAC AAGGAACTGG CCCGCGCCTT CGAGTCCTTC CCCGGCGACG CCGACCAGAT CTATCCGGGC TGGCGCAAGG CCCTGGGCGT CGAGGACACC CGCAGCGCCC TTCCGGCGTA A
|
Protein sequence | MDQSSRYVNL ALKEEDLIAG GEHVLCAYIM KPKAGYGYVA TAAHFAAESS TGTNVEVCTT DDFTRGVDAL VYEVDEAREL TKIAYPVALF DRNITDGKAM IASFLTLTMG NNQGMGDVEY AKMHDFYVPE AYRALFDGPS VNISALWKVL GRPEVDGGLV VGTIIKPKLG LRPKPFAEAC HAFWLGGDFI KNDEPQGNQP FAPLRDTIAL VADAMRRAQD ETGEAKLFSA NITADDPFEI IARGEYVLET FGENASHVAL LVDGYVAGAA AITTARRRFP DNFLHYHRAG HGAVTSPQSK RGYTAFVHCK MARLQGASGI HTGTMGFGKM EGESSDRAIA YMLTQDEAQG PFYRQSWGGM KACTPIISGG MNALRMPGFF ENLGNANVIL TAGGGAFGHI DGPVAGARSL RQAWQAWRDG VPVLDYAREH KELARAFESF PGDADQIYPG WRKALGVEDT RSALPA
|
| |