Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2394 |
Symbol | |
ID | 3835828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2783369 |
End bp | 2784550 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637826502 |
Product | PepSY-associated TM helix |
Protein accession | YP_427481 |
Protein GI | 83593729 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.320508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAAGA CCCCGCGGAA ATCCTCTGGA GCGCGTCTCT GGTTCCTTGT GCATTCCTGG ATGGGATTGC CGTTGTGGGC CTATGTCTTC TTTCTGTGCT TCACCGGCAC CCTGGCCTCG GTCAGCCACG AGATCATGTG GCTGATCGAT CCGGAGGTGC GGGCGGGCGC CAGCGGCGAT CCGGCTCCGG CCAGCGCCCT GATCGCCGCC GCCGAGGCCG CCGCCCCGGG GTCGCGCGCC CTGTCGGTTG GTTGGGGCGC CGATTACATG GCGGCGACGG TGCGTCTAGG CCTTGAGAAC GGCCTTTACG CCATGGCCTA TGTCGATCCG GTCAGCGCCA CCCTGCGCGG CATCGGTTCG GATAACCCCT TGCCGGTCTT CCTGCGCGCC CTGCATGGCT GGCTGCTGTC GCCGTGGACG GGCGGCTATC CCTGGGGGTG GTATCTGGTG GCGGTGATGG CGATTCCGCT GCTTGGATCG GTCGTTACCG GCATGGTCGT TTACAAGCGC TTCTGGCGGG CCTTCTTCAC CCGCCCCAAG CTGCGCACCG GCAAGGGCGC CCGGGTTCTC CTTGGCGATC TTCACCGGCT TGGCGGGGCG TGGTCTTTGT GGTTCGTGCT GCTAATCGGC GTCACCGGCC TGTGGTTCCT GGTTCAGGCG GCGATCGTCG ATCTGCGCGG CGCGCTTGAT CCCGGGGCGC CGCTGGTGGT CATCGACCGG GCCGATCTGC CCAAACGGGC CCCGGGCGAG CATCCGCCGC CGGCCGAGGT CGACGCGGCT TTGGCCGCCG CCCAGGCCAC CCATGCGGGT GGGCGGGTTA CCGCGCTTTA TTTCCCCGGC ACCGCCTTTG ATCCGATCTA TGCCTATGGC AGCGGCCGGG TGCCGCTCCT GTCGGATGTG ACCTATGTCC ATCCGCGCAC GGCGGAGGTG CTTTATAGCA AAAAGGGCGG AGACTCCGGG CCCCTGGGCT TGGCCTCGCA GATCCTGCGG CCGCTCCATG TCGGCGATTT CGGCGGCCCC GGAGCCCTGG GGCTGGCGAT CAAGGGGGTG TGGTTCCTCT TCGGCTTGAT TTTGTCGATG CTGATCTTTT CGGGGATGCT GATCTGGAGC AAGCGCACCG TTCGCGCCAC CCTCGAGATG CGCCAAGGCG CTAAGCTTGG GGAGAGCCCC TCCCATGCGT AA
|
Protein sequence | MDKTPRKSSG ARLWFLVHSW MGLPLWAYVF FLCFTGTLAS VSHEIMWLID PEVRAGASGD PAPASALIAA AEAAAPGSRA LSVGWGADYM AATVRLGLEN GLYAMAYVDP VSATLRGIGS DNPLPVFLRA LHGWLLSPWT GGYPWGWYLV AVMAIPLLGS VVTGMVVYKR FWRAFFTRPK LRTGKGARVL LGDLHRLGGA WSLWFVLLIG VTGLWFLVQA AIVDLRGALD PGAPLVVIDR ADLPKRAPGE HPPPAEVDAA LAAAQATHAG GRVTALYFPG TAFDPIYAYG SGRVPLLSDV TYVHPRTAEV LYSKKGGDSG PLGLASQILR PLHVGDFGGP GALGLAIKGV WFLFGLILSM LIFSGMLIWS KRTVRATLEM RQGAKLGESP SHA
|
| |