Gene Rru_A2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2385 
Symbol 
ID3835819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2776995 
End bp2777909 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID637826493 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_427472 
Protein GI83593720 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.281823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCG CTCTCGCTCG CCTTGCCTGT GCGCTTGTCC TGGGATTGAC CACGGCCGCT 
GCCGCCCGGG CCGATGTGGT GGTGTCTTCA AAGATCGACA CGGAAGGCGG GGTGCTGGGC 
AATATCATGC TGCTGGCCCT TGAGGCCCAC GGCATCAAGA CCGAGGATCG CTTGCAGCTT 
GGCGGAACGC CGGTGGTGCG CAAGGCGATC ACCGCCGGGG AAATCGACCT GTATCCCGAA 
TATACCGGCA ATGCCGCCTT CTTCTTCAAT AAGGCCGATG ATCCGCTGTG GAAGGACGCG 
GCCCAGGGCT TCGCCACCGC CAAGGCCTTG GATTACGAGG CCAATCACAT CGTTTGGCTG 
ACCCCGGCCC CGGCCAATAA CACCTGGGCG GTGGCCTTGC GCCGCGATCT GGCCGAGGCC 
GAGACAATCA CCAGCTTTTC GGACTTCGGA AAATGGGTGG CCGGTGGCGG TCGGGTGAAA 
TTGGCGGCCT CGGCGGAATT CGTCAATTCC GCAGCCGCCC TGCCGGCCTT TCAAAAGGCC 
TATGGCTTCA CCCTTACCCC CGAGCAGTTG ATCGTGCTGT CGGGTGGCGA TACGGCCGCG 
ACCATCAAGG CGGCGGCGGA CCAGACCAAT GGCACCAATG CGGCGATGGT CTATGGCACC 
GATGGCGGCA TCGCCGCGTC CGATCTGGTG GCCTTGAGCG ATGACAAGGC GGTGCAGCCG 
GTCTATGCCC CGGCGCCGAT CGTCCGCGAG GAAACCCTGA AGCGCCATCC CGAGATCGAG 
CCGATCCTGG CGCCGATCTT CGCCGCCCTT GATCTGGAAA CCCTCCAAGC CCTCAACGCC 
CGGGTTCAGG TGGGCGGCGA GCCGGCCCGG GCGGTGGCCA AGGACTTTCT GACCAGCCAC 
GGGTTGCTTC CCTAG
 
Protein sequence
MKSALARLAC ALVLGLTTAA AARADVVVSS KIDTEGGVLG NIMLLALEAH GIKTEDRLQL 
GGTPVVRKAI TAGEIDLYPE YTGNAAFFFN KADDPLWKDA AQGFATAKAL DYEANHIVWL 
TPAPANNTWA VALRRDLAEA ETITSFSDFG KWVAGGGRVK LAASAEFVNS AAALPAFQKA 
YGFTLTPEQL IVLSGGDTAA TIKAAADQTN GTNAAMVYGT DGGIAASDLV ALSDDKAVQP 
VYAPAPIVRE ETLKRHPEIE PILAPIFAAL DLETLQALNA RVQVGGEPAR AVAKDFLTSH 
GLLP