Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2297 |
Symbol | |
ID | 3835725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2658200 |
End bp | 2659129 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826399 |
Product | ribokinase |
Protein accession | YP_427384 |
Protein GI | 83593632 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0434925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGGCA GGATCGCCGT TGTCGGCAGC AATATGGTTG ACCTGATTAC CTATGTCACC CGCATGCCCG ACAAGGGCGA GACCATCGAG GCGCCGAACT TCGCCCTGGG CTGCGGCGGC AAGGGGGCCA ATCAGGCGAT CGCCGCCGCC CGCTTGGGCG CCGATGTGCT GATGGTCACC CGGGTTGGCG ATGACATCTT CGCCGACAAT ACCATCGCCA ATTTCAAGGC CAATGGCATC GATACCCGCT TTGTGCGCAA GGTTCCGGGC ACGCCGAGCG GCGTCGCGCC GATCTTCGTC GAACAAAACG GCGAAAACTC GATCCTGATC GTCAAGGGCG CCAATGCCCA TCTATCGCCG GCCGATGTCG AGGAGGCCGG CGAGGCGCTG AAAGGCTGCG CCCTGATCCT GATGCAGCTC GAAGTGCCCC TGGAAACCAT CTATGCCACG GTGGCCTTTG GCGCGGCGCA CGGCATTCCG ACCTTGCTCA ATCCCGCCCC GGCGGTGCCC GAGCTCGATG TCGAGCGCCT GCGCACGCTC TCCTTCCTGA CCCCCAATGA AACCGAACTG GCGATCTTGT CGGGGATGCC GGTGGCGAGC GAAACCGAGG TCGAGGCCGC CGCCCGCAGC CTGATCGCCA AGGGCGTGCG CACGGTGATC GTCACCATGG GCGCGCGCGG CGCCTTGCTG GTCGAGGAAA AGGGCGCCAC CCGCATCGCG CCGGTCCGCG TGACCCCCAA GGACACCACC GGGGCGGGCG ACGCCTTCAT CGGCAGCTTC GCCCATTACT ATACGCAAAA CGGCGATATC GCCGCCGCCC TGCGCAAGGC GGTGCGCTAT GCCGCCGATT CGATCACCCG CAACGGCACC CAAAGCTCCT ATGCCACCCT GGCCGAGTTC GAGGCCTTCT GCGCGACGAT CGACGCCTAG
|
Protein sequence | MSGRIAVVGS NMVDLITYVT RMPDKGETIE APNFALGCGG KGANQAIAAA RLGADVLMVT RVGDDIFADN TIANFKANGI DTRFVRKVPG TPSGVAPIFV EQNGENSILI VKGANAHLSP ADVEEAGEAL KGCALILMQL EVPLETIYAT VAFGAAHGIP TLLNPAPAVP ELDVERLRTL SFLTPNETEL AILSGMPVAS ETEVEAAARS LIAKGVRTVI VTMGARGALL VEEKGATRIA PVRVTPKDTT GAGDAFIGSF AHYYTQNGDI AAALRKAVRY AADSITRNGT QSSYATLAEF EAFCATIDA
|
| |