Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2294 |
Symbol | |
ID | 3835722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2653823 |
End bp | 2655451 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637826396 |
Product | Alpha amylase, catalytic region |
Protein accession | YP_427381 |
Protein GI | 83593629 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.960991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTC AGGAATGGTG GAAACGGGCC GTTATCTATC AAATCTATCC GCGCAGTTTC CAGGATGCCG ATGGCGATGG CATCGGCGAT TTGGCCGGCA TCGCCCAACG CCTGGATTAC CTGTCGTGGC TGGGGGTGGA CGCGATCTGG ATCTCGCCCT TCTATACCTC GCCGATGAAG GATTTCGGCT ACGACATTCA AGACTACCGC GATGTCGATC CGATCTTCGG CACCCTGGCC GATTTCGACG CCCTGGCGGC GCGGGCCCGC GCGCTGGGGC TGAAGCTGAT CTTGGATTTC GTTCCCAACC ACACCTCTGA TCGGCATCCG TGGTTTCTCG AATCCCGCCA ATCGCCCGCC AGCGCCAAGC GCGACTGGTA CATCTGGCGC GACCCGGCCG CCGATGGCGG CCCGCCGACC AACTGGCTGG CCGAATTCGG CGGCAGCGCC TGGGAATACG ACGAAGCCAG CGGCCAGTAT TACTACCACG CCTTCCTCAA GGAGCAGCCC GACCTCAATT GGCGCAATCC AGAAGTCCGC GCGGCGATGT ATGACGCCAT GCGCTTTTGG CTCGAGCGCG GGGTGGATGG CTTCCGCGTC GATGTGATGT GGCATCTGAT CAAGGACGAC CAGTTCCGCG ACAATCCGCC CAATCCGGCC CGCCCGCCCA ATGCCGGTCC GGCCAATGCC CTGATCCCGC TCTACACCGC CGATCGCCCC GAAGTGCACG ACATCGTGCG CGAGATGCGC GCCGTGGTCG ACGCCTATCC CGAACGCGTG CTGATCGGCG AGATCTGGCT GCCCACCGAT CGCCTGGTCA CCTATTACGG CCATGATCTG CGCGGTGCCC ATCTGCCCTT TAATTTCCAA TTGATCGGCG CCGCCTGGGA CGCCGGCGTC ATCAAAGAGA TCGTCGGCGA CTACGAAAAG GCCCTGCCCC GGGGCGGCTG GCCCAATTGG GTGATGGGCA ATCACGACAA GGGCCGCATC GCCAGCCGCC TGGGCCCCCG GCAGGCCCGG CTGGCCATGC TGCTGCTGCT CACCCTGCGC GGCACCCCCA CCCTTTACTA TGGCGACGAG ATCGCCATGC GCGACGTGCC GATCCCCCCC GACCGGGTCT GCGATCCTTA CGAAAAGAAC GTGCCCGGCC TGGGTCTGGG GCGCGACCCC CAGCGCACGC CGATGCAATG GGAGGACGCT CCCCAGGCCG GCTTCACCCG CGCTTCCCGA TCCTGGTTGC CGATCGCCGC CGATGCCTCA ACGGTCAATG TCGCCGCCCA ACGCGCGGCG CCGGCCTCGA TGCTGACCCT CGTCCACCGC CTGATCGCCC TGCGCAAAGC CGAAGCGGCC CTAACTATCG GCGATTATGG GGCGCTCGAC GCTCCCGAGC GGGTGGTGAT GTTCCTGCGC CGCGTTCCCG GGCGCCGCCT GCTCATCGCC CTCAATCTGG GGGAAAGCGC CCAAAGCCTG AGCCTGCCCG GCGACAGCCG CCAAGCCACC ACCCTGCTGT CCACCGACCC GGAGCGCCCG CTGGGCGATC TGGCCCCGGC CTTCACCCTT GGCGGGGGCG AGGGCATCGT CGTTTTGCTG GCCGACCGGG AAACGGCCCC CCCGTCCCCG GCGGCGTAA
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Protein sequence | MSGQEWWKRA VIYQIYPRSF QDADGDGIGD LAGIAQRLDY LSWLGVDAIW ISPFYTSPMK DFGYDIQDYR DVDPIFGTLA DFDALAARAR ALGLKLILDF VPNHTSDRHP WFLESRQSPA SAKRDWYIWR DPAADGGPPT NWLAEFGGSA WEYDEASGQY YYHAFLKEQP DLNWRNPEVR AAMYDAMRFW LERGVDGFRV DVMWHLIKDD QFRDNPPNPA RPPNAGPANA LIPLYTADRP EVHDIVREMR AVVDAYPERV LIGEIWLPTD RLVTYYGHDL RGAHLPFNFQ LIGAAWDAGV IKEIVGDYEK ALPRGGWPNW VMGNHDKGRI ASRLGPRQAR LAMLLLLTLR GTPTLYYGDE IAMRDVPIPP DRVCDPYEKN VPGLGLGRDP QRTPMQWEDA PQAGFTRASR SWLPIAADAS TVNVAAQRAA PASMLTLVHR LIALRKAEAA LTIGDYGALD APERVVMFLR RVPGRRLLIA LNLGESAQSL SLPGDSRQAT TLLSTDPERP LGDLAPAFTL GGGEGIVVLL ADRETAPPSP AA
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