| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2253 |
|---|
| Symbol | |
|---|
| ID | 3835681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 2615209 |
|---|
| End bp | 2615928 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826355 |
|---|
| Product | amino acid ABC transporter permease |
|---|
| Protein accession | YP_427340 |
|---|
| Protein GI | 83593588 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGG ATCTGGTCGC CACCTTCCTG CCCAAGCTGC TGTTCGAAGG GCTTCCCGTC
ACCCTCAAGC TGGTGACCCT GGCCGTCGCC ATCGGCGTTT TCATCGCCAT CCCAACGGCG
TTGCTGCGCG TTCACCCCAG CCCGCTGGTC CGCGCCTTCC CTTACGCCTT CATCTTCTTT
TTCCGCGGCA CGCCGCTGCT GATCCAGATC GCCCTGGTCT ATTACGGCCT GTCCACCCTG
CCGTGGATCC GTGAGAACGA GGTGCTGTGG CCGATCCTGC GCGAGCCGTT CTGGTGCGCG
CTGATCGCTT TCGCCCTGAA TACCGGCGCC TATTCGGCCG AGATCCTGCG CGGCGCCATC
CAGGCCATTC CGCGCGGCGA GGTCGAGGCG GCGCGGGCCT ATGGCATGCG CGGCCTGCTG
ATCGTGCGGC GGATCATCCT GCCGCGCGCC TTCCAGATCG GCCTGCCGGC CTATGGCAAC
GAGATCATCC TGATCCTCAA GGGCAGCGCC CTGGCCTCAA GCATCACCTT GCTCGATATC
ACCGGGGTCG CCCGCCTTCT CTATGCCCGC TATTACACGC CGGTTGAGGC CTTCGTCACC
GCCGGGGTGA TCTATCTGAT CCTGGTTTAC CTGCTGACCC GCGGCCTGCG GCTGATCGAA
CGCCGGCTGT CGCGCCACCT GCTCGGCCCG CCGGAAACCG AGCTTGCCGA AGACCGCTAG
|
|---|
| Protein sequence | MNLDLVATFL PKLLFEGLPV TLKLVTLAVA IGVFIAIPTA LLRVHPSPLV RAFPYAFIFF
FRGTPLLIQI ALVYYGLSTL PWIRENEVLW PILREPFWCA LIAFALNTGA YSAEILRGAI
QAIPRGEVEA ARAYGMRGLL IVRRIILPRA FQIGLPAYGN EIILILKGSA LASSITLLDI
TGVARLLYAR YYTPVEAFVT AGVIYLILVY LLTRGLRLIE RRLSRHLLGP PETELAEDR
|
|---|
| |