| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2206 |
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| Symbol | |
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| ID | 3835634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2561938 |
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| End bp | 2563584 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826308 |
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| Product | fumarase |
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| Protein accession | YP_427293 |
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| Protein GI | 83593541 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0177181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATG TATCGGGGGA TACCAGGATC ATGATCGATC GCGCTTTCGC GGACGTCTTT
CCCTTGGCGG AGGATAAAAC CCTCTACCGC GCTCTCGAAG GGACGGAGGG GTTGGTTTCG
GTGGAGCGGT TCCGCGGCGA GGAGATGCTG GTCGTCGCCC CCGAGGCCCT GACCCGTCTG
GCGCAAGAGG CCTTCCGCGA CATCGCCCAT CTGCTGCGCC CGGCCCATCT TTCCCAGCTG
CGCGCCATCA TGGACGATCC CGAGGCTTCG GCCAACGACC GCTTCGTCGC CCTGGAACTG
CTGAAAAACG CCAATATCTC GGCCGGCATG GTCTTGCCGA TGTGCCAGGA CACCGGCACG
GCGATCATTC AGGGCAAGAA GGGCCAGCGG GTGTTTTCGG GCGACGACGA CGCCCTCGCC
CTGTCGGAAG GCGTGGCCCG GACCTATCAG ACCCTGAACC TGCGCTATTC GCAGATGGCG
GCGCTGTCGG TTTTCGACGA GGTCAATACC GGCAACAACC TGCCCGCCCA GATCGACCTC
TACGCCACGC CGGGCGACGC CTATAAATTC CTCTTCATGG CCAAAGGCGG CGGCTCGGCC
AATAAGGTCT TCCTTTACCA GCAGACCAAG GCCCTGCTCA ATCCCGAGAG CCTCGCCCGC
TTCCTTGACG CCCAGGTGCG CACGCTGGGC ACCGCCGCCT GCCCGCCCTA TCACCTGTCG
ATCGCCATCG GCGGCACCAG CGCCGAGGCC TGCCTGAAGG CGGTGAAACT GGCCAGCGCC
AAGTATCTCG ATGGCCTGCC GACCACCGGG GGCAAGGATG GCCACGCCTT CCGCGATCTG
GCGCTCGAGG CCGAGGTTCT GGCGATGACC CGGGCCATGG GCATCGGCGC CCAGTTCGGC
GGCAAGTATT TCTGCCACGA CGTGCGCGTT GTCCGCCTGC CCCGCCACGG CGCGAGCTGC
CCGGTGGGCA TCGGCGTCTC CTGCTCGGCC GACCGCCAGA TGCTGGGCAA GATCACCGCC
GAAGGGCTGT TCCTCGAACA GCTTGAAACC AATCCCGCCC ATTACCTGCC CGACGTGCGC
ACCGAGAAGC TGTCGGCCGA GGTGGTCAAG ATCGACCTGT CGCGGCCGAT GGCGGAAATC
CGCGCGACGC TCAGCGGCTA TCCGATCAAG ACCCGGGTCT CGCTGTCGGG GCCGATGATC
GTCGCCCGCG ACATCGCCCA CGCCAAGCTC AAGGAACGGC TGGATCGCGG CGAGGGCCTG
CCCGAGTACT TCAAGAACGG CGCGGTCTAT TACGCCGGCC CGGCCAAGAC CCCGGCCAAT
TACGCCTCGG GCTCCTTTGG CCCGACCACC GCCGGCCGCA TGGACGCCTA TGTCGATCTA
TTCCAAGAGA ACGGCGGCTC GATGGTGATG ATCGCCAAGG GCAACCGTTC CAAGGCGGTG
ACCGAGGCCT GCAAGAAGCA CGGCGGGTTC TATCTGGGCT CGATCGGCGG CGCCGCCGCC
CAACTGGCCC TCAACAGCAT CCGCAAGGTC GAGGTTCTGG AATACCCGGA ACTGGGCATG
GAAGCCATCT GGCGCATCGA GGTCGAGGAT TTTCCGGCCT TCATCATCGT CGATGACAAG
GGCAACGACT TCTTCCAGCA GCTTTGA
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| Protein sequence | MTDVSGDTRI MIDRAFADVF PLAEDKTLYR ALEGTEGLVS VERFRGEEML VVAPEALTRL
AQEAFRDIAH LLRPAHLSQL RAIMDDPEAS ANDRFVALEL LKNANISAGM VLPMCQDTGT
AIIQGKKGQR VFSGDDDALA LSEGVARTYQ TLNLRYSQMA ALSVFDEVNT GNNLPAQIDL
YATPGDAYKF LFMAKGGGSA NKVFLYQQTK ALLNPESLAR FLDAQVRTLG TAACPPYHLS
IAIGGTSAEA CLKAVKLASA KYLDGLPTTG GKDGHAFRDL ALEAEVLAMT RAMGIGAQFG
GKYFCHDVRV VRLPRHGASC PVGIGVSCSA DRQMLGKITA EGLFLEQLET NPAHYLPDVR
TEKLSAEVVK IDLSRPMAEI RATLSGYPIK TRVSLSGPMI VARDIAHAKL KERLDRGEGL
PEYFKNGAVY YAGPAKTPAN YASGSFGPTT AGRMDAYVDL FQENGGSMVM IAKGNRSKAV
TEACKKHGGF YLGSIGGAAA QLALNSIRKV EVLEYPELGM EAIWRIEVED FPAFIIVDDK
GNDFFQQL
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