Gene Rru_A2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2197 
Symbol 
ID3835624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2551477 
End bp2552121 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID637826299 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_427284 
Protein GI83593532 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGA TCTTTGCCAA TCCCCTCTCT CTTCCCGGCA CCGCCCAGGA GCGGGTTTCC 
CGCGCCGTTG ACAGCCTGCG CCAGGGCCAG GGGGTCATCG TCGTTGACGA TGAGGACCGC 
GAAAACGAGG GAGACCTTAT TTTCGCCGCC GAAACCCTGA CAGCCGAACA GATGAGCCGG 
ATGATCCGCG ATGGCTCGGG CATCGTTTGC CTGATCCTGA CCGACCCCGA CCTTGATCGT 
CTGGCTTTGC CGCCGATGGT CGCCCACAAC ACCTCGCGCA ACGGCACCGG CTTTACCGTC 
TCGATCGAGG CGCGCGAGGG CGTGACCACC GGGGTCTCGG CCGCCGATCG GGTCACCACC 
ATCCGCGCCG CCATCGATCC CGCCAGCACC GCCGATGATC TGGCCCGCCC CGGCCACGTC 
TTCCCCTTGC GCGCCCATGC CGATGGCCTG AGCGCGCGCC GGGGCCATAC CGAGGCGACC 
ATCGCCCTGA TGAGGTTGGC GGGGCTGCGC CCGGCCGGGG TGCTGTGCGA GGTGATGAAC 
CCCGATGGCA CCATGGCCCG CCTGCCGACC CTGATCGGCT ATGGCCAAGC CCATGGCCTG 
CCCATCGTCA GCATCGAGGA TCTGGTCGCC GTCGGCGCCC GCTGA
 
Protein sequence
MNQIFANPLS LPGTAQERVS RAVDSLRQGQ GVIVVDDEDR ENEGDLIFAA ETLTAEQMSR 
MIRDGSGIVC LILTDPDLDR LALPPMVAHN TSRNGTGFTV SIEAREGVTT GVSAADRVTT 
IRAAIDPAST ADDLARPGHV FPLRAHADGL SARRGHTEAT IALMRLAGLR PAGVLCEVMN 
PDGTMARLPT LIGYGQAHGL PIVSIEDLVA VGAR