Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2192 |
Symbol | |
ID | 3835619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2546081 |
End bp | 2547874 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637826294 |
Product | peptidase M3B, oligoendopeptidase-related clade 3 |
Protein accession | YP_427279 |
Protein GI | 83593527 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.246068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCATG TTGCCGCCCA GGCGAACGCT GTTTCCCCTC TTCCCGTCTG GGACCTCGGC GATCTCTATG ATGGTCCCGA CTCCGCGGCC CTGAAGACCG ATCTTGCCGA AACCGAAAGC GGGGCCAAGG CCTTCCGCGA CACTTACGCC GGCAAGGTCG CCGGGCTTGA TGGCGCCGCC CTGGGCGAAG CCATCGTCGC CTTCGAGCGC CTATCCGAGA CGCTTTATCG CATTCTCAGC TATTCGCAGC TGCTGCAGGC CGGCGATGTG ACCGATGTCG CCATCGGTCA GTTCCATCAG GCGATGATGG AAAAAGGCAC GGCCATCTCG AGTCAGATGT TGTTCTTCAC CCTGGAAATA AACCTTATCG ACGACGACGC CCTGGCCGAA AAGCTGAAAA ATCCGCTGGC CGGGCGTTAT GCGCCGTGGA TTCGCGATTT GCGGGCCTTC CGCAAGCATC AGCTCTCCGA TGACATGGAA CGCCTGCTCA ACGAAAAGGA TGTGGCGGGC AGCTCGGCCT GGATGCGGCT GTTCGACGAA ACCGTCGCCC ATCTGCGCTT CCCCATCGAC AACGAGACCC TGACCTCGAC CGAAGCCTTC GATCGCCTGT CCGATCCCCA GCCCGAGCGC CGCAAGGCCG CCGCCAAGGC CATCGGCGGC GTTCTGGAAG ACAATCTGCG GCTGTTTTCG CGTATCACCA ATACCCTGGC CAAAGACAAG CAGATCGATG ATTCCTGGCG CGGCTACGCC CATCCGATGG CGGCGCGCAA CCTGGGCAAT CAGGTGGAAG ACGCCGTGGT CGACGCCCTG GTCTCGGCGG TGCGCGGCAG CTATGGCGAC CTCTCGCACC GCTATTACCA GATGAAGGCC AAATGGTTCG GCCGCGACAC CTTGGATTAT TGGGACCGCA ACGCCCCCCT GCCCGAAGCC GATGACAGCC GCTTCACCTG GGATCAGGCC CGCGACACCG TTCTGGGAGC TTACGGCGCC TTCTCGCCCG AATTGGCGGC GGTGGGCAAG CGCTTCTTCG ACAATCCGTG GATCGACGTG CCCGCCCGCC CGGGCAAGGC CTCGGGCGCC TTCGCCCATC CCACCGTGCC CTCGGCCCAT CCTTACCTGC TGCTCAACTT CATGGGCCGC ACCCGCGACG TCATGACCCT GGCCCATGAA CTGGGCCATG GCGTTCATCA GGTGCTGGCC GCCCGCCAGG GGCCGCTGTT GTCGGATACG CCGCTGACCC TGGCCGAGAC GGCCTCGGTC TTTGGCGAGA TGCTGACCTT CCGCGCCATG CTCGATTCCG CCGGCGACGC CAAGCGTCGG CGCATCATGC TGGCGAGCAA GGTCGAGGAC ATGATCAACA CGGTGGTCCG CCAGATCGCC TTCCACACCT TCGAGCACAA AGTGCATAGC GAGCGCCTGC AAGGCGAGCT GTCCCCCGAT CGCCTGTGCG AGATCTGGAT GGAGGTGCAG ACCGAAAGTC TCGGTCCGGC CTTCCGTTTC GATGCCGAGT ACCGCACCTA TTGGACCTAT ATCCCCCATT TCATCCACTC GCCGTTCTAT GTCTACGCCT ATGCCTTCGG CGACTGTCTG GTGAACTCGC TTTATGCGGT CTATCAGGAG GGGAGCGTTC CCGACTTCCA GGCGAAATAC CTGGATATGC TGGGCGCGGG GGGAACGCTG CGCCACAAGG AGCTTCTCGC CCCCTTCGGG CTCGACGCCT CCAACCCGGA TTTCTGGAAG CGCGGGCTTG GGGTGTTGAA GGGCTTCATT GACGAACTGG AAGAGGTGGC GTGA
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Protein sequence | MTHVAAQANA VSPLPVWDLG DLYDGPDSAA LKTDLAETES GAKAFRDTYA GKVAGLDGAA LGEAIVAFER LSETLYRILS YSQLLQAGDV TDVAIGQFHQ AMMEKGTAIS SQMLFFTLEI NLIDDDALAE KLKNPLAGRY APWIRDLRAF RKHQLSDDME RLLNEKDVAG SSAWMRLFDE TVAHLRFPID NETLTSTEAF DRLSDPQPER RKAAAKAIGG VLEDNLRLFS RITNTLAKDK QIDDSWRGYA HPMAARNLGN QVEDAVVDAL VSAVRGSYGD LSHRYYQMKA KWFGRDTLDY WDRNAPLPEA DDSRFTWDQA RDTVLGAYGA FSPELAAVGK RFFDNPWIDV PARPGKASGA FAHPTVPSAH PYLLLNFMGR TRDVMTLAHE LGHGVHQVLA ARQGPLLSDT PLTLAETASV FGEMLTFRAM LDSAGDAKRR RIMLASKVED MINTVVRQIA FHTFEHKVHS ERLQGELSPD RLCEIWMEVQ TESLGPAFRF DAEYRTYWTY IPHFIHSPFY VYAYAFGDCL VNSLYAVYQE GSVPDFQAKY LDMLGAGGTL RHKELLAPFG LDASNPDFWK RGLGVLKGFI DELEEVA
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