Gene Rru_A2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2174 
Symbol 
ID3835601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2524960 
End bp2525940 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID637826276 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_427261 
Protein GI83593509 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.837034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGG TTCAACCGCT GCTGCGGGCC ACGGCGCTGG TCAAGACCTA TCAAACCCGC 
CGCTCGCCGC TGCGCCGGCC GAGCCCGCCG GTGGTCGCCG TCGATCAGGT CACCTTCGAT 
GTCTGGCCCG GCGAGACCCT AGGGCTGGTC GGTGAATCGG GGTGCGGCAA ATCGACCCTC 
GGGCGGTGCC TGCTGCGGCT GACCGATATC TCCGCCGGCA CCTTGGAGTT CGAGGGGCGG 
GATATCACCA AGGCTTCGCT GCACGCTCTG CGGCCGACGC GGCGCCGGAT GCAGATGGTC 
TTCCAAGACC CCTACGCCTC GCTCAATCCG CGCCGCCGGG TTGGCGATTT GCTGGCCGAA 
CCGCTGCGCG TTCACAAACT GGGCACCGAG CGCCAGATCG CCGATCGGGT GGCCGAGTTG 
CTGACCCAGG TCGACCTGCG CCCCGACCAC GCCCAGCGCT ATCCCCATGA ATTCTCGGGC 
GGTCAGCGCC AGCGCATCGG CATCGCCCGC GCCCTGGCCC TGGAACCCCG GCTGATCGTC 
GCCGACGAGC CGGTCTCGGC CCTTGACGTG TCGGTGCAGG CCCAGGTCAT CAATCTGATG 
ACCGATCTGC GCGAGCGCCT GGGGTTGACC TATGTCTTCA TCGCCCATGA CCTCAGCGTT 
GTGCGCCATA TCTCCAGCCG GGTGGCGGTG ATGTACCTGG GCGCCATCGT CGAAATCGGC 
GCCACCGATG ATATCTTCGG AAGCCCGCAC CATCCCTATA CCCAGGCGTT GCTATCGGCG 
GTGCCGGTGA CCGATCCCGA TCGCTCGAAG CGGCGCCAGC GGATTTTGCT CGAGGGCGAG 
ATTCCCAACC CGTCGCATCG GCCAAGCGGC TGCCGATTCC ACTCGCGGTG CCCCTATGCC 
GATGACCAGT GCCGCGCCGT GTCGCCGCCG CTGGCGGCGG CCGAACGGGG TCGCCTCGTC 
GCTTGTCATA AGCCATTATA G
 
Protein sequence
MTPVQPLLRA TALVKTYQTR RSPLRRPSPP VVAVDQVTFD VWPGETLGLV GESGCGKSTL 
GRCLLRLTDI SAGTLEFEGR DITKASLHAL RPTRRRMQMV FQDPYASLNP RRRVGDLLAE 
PLRVHKLGTE RQIADRVAEL LTQVDLRPDH AQRYPHEFSG GQRQRIGIAR ALALEPRLIV 
ADEPVSALDV SVQAQVINLM TDLRERLGLT YVFIAHDLSV VRHISSRVAV MYLGAIVEIG 
ATDDIFGSPH HPYTQALLSA VPVTDPDRSK RRQRILLEGE IPNPSHRPSG CRFHSRCPYA 
DDQCRAVSPP LAAAERGRLV ACHKPL